Pairwise Alignments

Query, 402 a.a., ammonium transporter from Pseudomonas simiae WCS417

Subject, 445 a.a., ammonia channel protein from Pseudomonas simiae WCS417

 Score =  164 bits (414), Expect = 6e-45
 Identities = 128/420 (30%), Positives = 197/420 (46%), Gaps = 48/420 (11%)

Query: 11  LVHSSNTLFILIGAVMVLAMHA-GFAFLEVGTVRQKNQVNALSKILSDFAISTLAYFFIG 69
           +++S +T ++L    +VL M   G A    G VR KN ++ + +  +   + ++ +   G
Sbjct: 31  VLNSGDTAWMLTATALVLFMTIPGLALFYGGMVRSKNILSVMMQCFAITGLISILWVVYG 90

Query: 70  YWISYGVSFMQPAAVISADHGYGLVKFF-----------------------FLLTFAAAI 106
           Y I++  + M+   V       G+ K F                       F +TFA   
Sbjct: 91  YSIAFDTTGMEQGVVNFNSFFGGMGKAFLAGVTPASITGPAALFPEAVFITFQMTFAIIT 150

Query: 107 PAIISGGIAERARFAPQLCATALIVAFIYPFFEGLVWNGNFGLQAWLLATFGASFHDFAG 166
           PA+I G  AER +F+  L   A+    +Y     +VW+GN GL  W          DFAG
Sbjct: 151 PALIVGAFAERMKFSAMLIFMAIWFTLVYAPIAHMVWSGNGGLM-WDWGVL-----DFAG 204

Query: 167 SVVVHAMGGWLALAAVLLLGPRNGRYREGRLVAFAPSSIPFLALGSWILIVGWFGFNVMS 226
             VVH   G   L A ++LG R G          AP ++ +  +G+ +L +GWFGFN  S
Sbjct: 205 GTVVHINAGVAGLVACIVLGKRKGF----PTTPMAPHNLGYTLIGAAMLWIGWFGFNAGS 260

Query: 227 AQTLNSVSGLVAVNSLMAMVG---GTVAALIIGRNDPGFLH--NGPLAGLVAICAGSDLM 281
           A   N  +G+  + + +A      G + A  I    P  L   +G +AGLVAI   +  +
Sbjct: 261 AAAANGTAGMAMLVTQIATAAAALGWMFAEWITHGKPSALGIASGVVAGLVAITPAAGTV 320

Query: 282 HPVGALVTGAVAGGLFVWFFIAAQDRWKI--DDVLGVWPLHGLCGVWGGIACGIFGQTAL 339
            P+GALV G VAG   + FF A   + K+  DD L  + +HG+ G+ G I  G+F   AL
Sbjct: 321 GPMGALVIGLVAG--VICFFCATSLKRKLGYDDSLDAFGVHGIGGIVGAILTGVFAAPAL 378

Query: 340 GGLGGVSLIS-----QLIGTALGVLVALVGGLLVYGVIKRVHGLRLSQEEEYYGADLSIH 394
           GG G V+ ++     Q  G    V+   +   ++  V+  V GLR+++EEE  G DL+ H
Sbjct: 379 GGFGTVTDVAAQVWIQCKGVGFTVIYTAIVTYVILKVLDMVMGLRVTEEEEAVGLDLAQH 438