Pairwise Alignments

Query, 1215 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1093 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  452 bits (1164), Expect = e-131
 Identities = 242/581 (41%), Positives = 360/581 (61%), Gaps = 5/581 (0%)

Query: 14  IILSAGVCLSTTVLAAATQPEHYNLLSRAGNVQLDTPMDATQRRWLQNKRELILGTAAPD 73
           ++L+ G+  ST  L A+++P H  LL+R+ +      +    R WL+ +  L++G+A PD
Sbjct: 8   VLLAIGLANSTE-LQASSEPRH--LLARSISAAAPLTLSGDDRHWLKQRERLVMGSARPD 64

Query: 74  YPPFDITSSGYDYEGITADYAGVLAKALALPVRVQRYPTREASIQALESGEIDLLGSSNG 133
           YPPF+I  S +DYEG++ADYAG++ + L +P+ V+R+ +R  +I AL  G IDLLGSSN 
Sbjct: 65  YPPFEINVSQHDYEGLSADYAGIIGEQLDIPIEVRRFDSRHEAITALRDGRIDLLGSSNA 124

Query: 134 FEATHPLLTLSAPYAVDQPVLVTREGETRSLSDGLAGLRLSLVYHYLPLEEVQKLYPKAI 193
           FEA    L+LS PYA D PV+VTREG +   +  LAGLRL++V HYLP   V+ LYPKA 
Sbjct: 125 FEAADAQLSLSTPYADDLPVIVTREGRSLKSTPELAGLRLAMVDHYLPAVSVRTLYPKAQ 184

Query: 194 IRAYPSYQNALNAVAFDQADVFLGDTISTHYMINKGYLKNIHMANFGKHEAYGFSFALRQ 253
           +  Y S    L AVA  +AD +LGD IST YMI K +   + + +F +     F+FA+  
Sbjct: 185 LSLYRSTLAGLAAVALGEADAYLGDAISTDYMIGKSFQGTLKIDHFSQLAPEAFAFAIAS 244

Query: 254 DQPILLNIVNAVLAALPTHERENIAKRWSAGSDILLTDQKL-QLTQREERWLKAHPVVTV 312
           D P L  +V+  L+ +   ER NI +RWS+G+  LL  + L  L++ EE W+ AHP ++V
Sbjct: 245 DNPRLHRLVDKALSRISESERLNILRRWSSGNTSLLLQRHLTALSEEEESWITAHPTISV 304

Query: 313 IANETFAPLTFFDADGNFRGITADLLELIRLRTGLRFEIQRGRDINAMIEQIDTGKVDII 372
           + N + APLTF DA     GIT DLL+ I LRTGL+F         AMI+++  G+  +I
Sbjct: 305 LVNTSLAPLTFNDAQHRPSGITLDLLKQISLRTGLQFTPVESASSQAMIDRLVRGEAQMI 364

Query: 373 GAIVPSSERETQLNFSRPYLENSYVLLTRKEPDAPLNLEQMAGKRLAITQGNPLEVTLRK 432
           GA+   ++R  QL ++RPYL +  VL+TR + ++P   + + GKR+A+ +G+P +  L++
Sbjct: 365 GALGYGADRLKQLRYTRPYLVSPRVLVTRNDGESPAQAKALDGKRIALVRGSPQQAVLQQ 424

Query: 433 DFPHIQLVETSDTFKAAELLAQGHVEGAVNSLVVANYLLSSHVFQDRLQIGTSIGTLPAL 492
            +P  ++VE  +     E +A G  + A++S + A Y + SHVF+DRL+I   +   PA+
Sbjct: 425 RYPQAEIVEVDNPLGQMEAVANGVADAALSSHINAAYYI-SHVFKDRLRIANMLDDAPAI 483

Query: 493 FALATSRDATELSSILDKALLSIAPDELGVINSRWRGYTAASDSYWRDYNDLIAQIIIGT 552
            A A + D  +L +ILDKALLSI P+EL  + +RWR  T  SDS WRDY  L  Q+++ +
Sbjct: 484 AAFAVAADQPQLQAILDKALLSIPPEELDQLINRWRTSTLVSDSPWRDYRTLALQVLVLS 543

Query: 553 GLLLLISLAWNAYMRRQIQHRRMAERALNDQFEFMRALVNE 593
            LLL   + WN+Y+R+ I  R  A+ AL  Q    R L+ +
Sbjct: 544 ALLLAGVVFWNSYLRKLINQRTEAQHALQAQLALSRGLLEQ 584



 Score =  404 bits (1038), Expect = e-116
 Identities = 241/520 (46%), Positives = 326/520 (62%), Gaps = 13/520 (2%)

Query: 701  RQLFDELRAAKERADEANRAKSTFLATMSHEIRTPMNAVIGMLELTLKRADQGHLDRPAI 760
            R L ++LR AK+ A++A++ KSTFLATMSHEIRTPMNAVIG+LEL L+ +  G  D   +
Sbjct: 579  RGLLEQLRQAKDDAEQASQTKSTFLATMSHEIRTPMNAVIGLLELALEDSRSGRSDAQTL 638

Query: 761  EVAYHSAKDLLELIGDILDIARIESGRLSLSPERVNLKDVIESVVRVFDGLARQKTLSLL 820
            + A+ SA  LLELIGDILDI+RIESG +SL P   NL +++ + +RVF+G AR K L L 
Sbjct: 639  QTAHDSAIGLLELIGDILDISRIESGHISLQPVPTNLVELVRATLRVFEGNARAKGLHLH 698

Query: 821  LEFKPGLDDTDVLIDPLRFKQVLSNLVSNAIKFTERGEVKVKVEVHATDLPQQVEMKLVV 880
             E     +   VL DPLR KQ+LSNL+SNAIKFT+RGEV+  + +        + ++L V
Sbjct: 699  GELPA--EPVWVLADPLRLKQILSNLISNAIKFTDRGEVQACLLLPKVAGHGILAIELNV 756

Query: 881  EDTGIGISREDQLRLFEPFSQADNSGHLARSGAGLGLVICRSLCAMMGGQLSLSSVPMVG 940
             DTGIGIS  DQ RLF  F Q D  G  AR GAGLGLVI R+L  +MGG LSL SV  VG
Sbjct: 757  RDTGIGISPADQARLFSAFVQVD--GPRARQGAGLGLVISRTLAELMGGALSLQSVEGVG 814

Query: 941  TQVYVSLKMHSLQPVHAVEEPKPATPTPAPVLNVLVVDDHPANRLLMCQQLGYLGHQFTA 1000
            T+V VSL++   +     +       + +  LN+LVVDD+PAN LL+ +QL  LGH  T 
Sbjct: 815  TRVQVSLRLPVCEAPAQADPQLTTHESNSGPLNILVVDDYPANLLLLERQLQTLGHHVTL 874

Query: 1001 AQHGAAGFQAWRQEHFDLVIADCNMPIMNGYELSRSIREYEQREQLPPCVILGFTANAQP 1060
            A++G      W++  FDLVI DC+MP+M+G+EL+R IR  E    LP   ILG TANAQ 
Sbjct: 875  AENGEIALARWQEARFDLVITDCSMPVMDGHELTRRIRSLEGERGLPAGRILGVTANAQA 934

Query: 1061 EEKRRCAEAGMNDCLFKPISLTILERQLAQI-----GPHPTSTLLDLSSLDALTGGDPQL 1115
            EE+ RC  +GM++CLFKPI L  L+  L Q+      P P  +  DL+ L  LT  D QL
Sbjct: 935  EERTRCLASGMDECLFKPIGLRTLKTHLPQVRPQQPSPEPFHSGFDLAELRHLTQDDEQL 994

Query: 1116 SRRLLEELLSSSAHDRQEIIALVARQAPLQDIIEQAHKIKGAARIVQASVLAAQCEALEQ 1175
            +R LLE+L  S   D   + AL +  AP + +   AH+IKG A++++   +   CEA+E 
Sbjct: 995  TRHLLEQLSISVGEDLAALRAL-STDAPDETVRALAHRIKGGAKMIRVRTVVKDCEAIEH 1053

Query: 1176 GCARGDELPLIETGIKTLEKCMLELERQLRMQLDSLTTEQ 1215
              A+G  LP +E   + L+  +  L  ++R  L+++   +
Sbjct: 1054 AHAKG--LPTVEQRAQ-LQVSLQALLDEMREALNAIAASR 1090