Pairwise Alignments

Query, 769 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  286 bits (731), Expect = 4e-81
 Identities = 220/637 (34%), Positives = 319/637 (50%), Gaps = 73/637 (11%)

Query: 169 LLLTGILLGLFYVMLTQPLVRIIRELSNRK----QARLDCPPGHEHDEIGVLVNVANQQF 224
           L L+G+L       +  P+ RI   ++  K    + RL     HE DE+   +N   +  
Sbjct: 181 LALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINRMAETL 240

Query: 225 ENMETEIQQRRHAEDRLTEYLGQLEDIVSARTLELKASNQRLSQSNDELEAAKMHALGMA 284
           +N   E+Q   H+ D+ TE + Q     +  T+E++         N EL+ A+  AL  +
Sbjct: 241 QNAHEELQ---HSIDQATEDVRQ-----NLETIEIQ---------NIELDMARKEALEAS 283

Query: 285 QARAAFLANMSHEIRTPLNGLLGMIALSLDSPLNAEQRQQLSIAHDSGKVLVELLNDILD 344
           + ++ FLANMSHEIRTPLNG+LG   L   S +   Q   L+    S   L+ ++N+ILD
Sbjct: 284 RIKSEFLANMSHEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILD 343

Query: 345 LSKFDAGQLELERIPFDLGSLVEDTANLLSQNA-APSVELTCLIDPQFPAQVLGDPTRVR 403
            SK +AG+L L+ IPF+L  L++DT  +L+  A A  +EL  LI    PA ++GDP R++
Sbjct: 344 FSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLK 403

Query: 404 QIVSNLLSNALKFTRFGRVDVRL---SAHE--GQVRIEVCDTGIGIAQEAQVKIFQPFTQ 458
           QI++NL+SNA+KFTR G + VR      HE   Q+RI V DTGIG++ +    +FQ F+Q
Sbjct: 404 QILTNLVSNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQ 463

Query: 459 AGAGITRQFGGTGLGLALTHNLCEAMKGRLSISSEVGFGSQFCADLPLP---THLPAIQP 515
           A   + RQ GGTGLGL ++  L E M G + + S  G GSQF   L LP       A+ P
Sbjct: 464 ADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEALPP 523

Query: 516 APLKGEVIAITSTGSGLTELLTTLLPHWGLTPRCYPRDEDLSGQTPDLLITDCPECLFRL 575
            PL G   AI        + L   L   GL+   +   + L            P     L
Sbjct: 524 QPLLGRRAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVL 583

Query: 576 RPTITAPILVVTAYGNFMPSE-------------EVAALAPLQQQA--RPLSRNALYQIL 620
              +          GN  P +             +   L P  +QA   P   N   Q+L
Sbjct: 584 GANL----------GNLSPEQLGHYHQQLERYHCQCVVLCPTTEQALYHPYLPNGHGQLL 633

Query: 621 QRN--LRSDAQLILDPIQMETAPLV--------HRARILLVEDNPVNQLVAKGMLSKLGC 670
            +    R   +L+L+ +Q    PL          R +IL V+DN  N L+ K +L  LG 
Sbjct: 634 SKPTCTRKLRRLLLELVQ-PRRPLAEGSNPNGQRRPKILCVDDNAANLLLVKTLLEDLGA 692

Query: 671 EVIVAAHGGEALKFLEEQHFDLVLMDCNMPVMDGYEASRQIR-----RSGRWPDLPIVAL 725
           EV+   +G  A++ ++E+ FDLVLMD  MP MDG   + QIR     +SG    LPIVAL
Sbjct: 693 EVLAVNNGYAAVQAVQEELFDLVLMDVQMPGMDGRACTEQIRLWENTQSGN--PLPIVAL 750

Query: 726 TANALSEERERCRAAGMNDYLAKPFRREELSGLLELW 762
           TA+A++ E+     +GM+DYL KP    +L+ ++  W
Sbjct: 751 TAHAMANEKRALLHSGMDDYLTKPISERQLAQVVMKW 787