Pairwise Alignments

Query, 322 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 333 a.a., L,D-transpeptidase YnhG from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  182 bits (463), Expect = 8e-51
 Identities = 102/265 (38%), Positives = 147/265 (55%), Gaps = 6/265 (2%)

Query: 2   LSRLSVVTCCLSLAALCAAGSASALQLPLPPPGEDIVGQVQVIKAKYED-TFADLGTTYD 60
           + R S +T  + + A  A  +A A+  PLPP G  ++GQ Q    +  D     +   +D
Sbjct: 1   MKRASFITLTI-IGAYSALQAAWAVDYPLPPEGSRLIGQNQTYTVQEGDKNLQAIARRFD 59

Query: 61  LGYSEMVAANPGVDAWLPGAGTEIVLPTRFILPPGPREGIVINLAEYRLYYFPKGQNVVY 120
                ++ AN  + A +P  GT I +P++ +LP  PREG+++NLAE RLYY+P G+N V 
Sbjct: 60  TAAMLILEANNTI-APVPKPGTLITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENRVQ 118

Query: 121 TFPLGIGREGWGSPIAHTSIIAKTPNPTWTPPASIKAEHAANGDPLPNVVPAGPDNPLGP 180
            +P+GIG +G  +P+  T I  K PNPTWTP A I+      G  LP V+PAGP+NPLG 
Sbjct: 119 VYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTAGIRQRSLERGITLPPVIPAGPNNPLGR 178

Query: 181 FKFTL--GTPGYLIHGSNMKFGIGTRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDAYK 238
           +   L  G   YLIHG++    +G R S GC RM   ++  +   V  GT V++IN   K
Sbjct: 179 YALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPVK 238

Query: 239 FG-RSGGKVYLEAHTPLNDDGTPSV 262
           F     G  Y+E H PL+ +   +V
Sbjct: 239 FSVEPNGIRYVEVHRPLSPEEEQNV 263