Pairwise Alignments

Query, 322 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 311 a.a., putative L,D-transpeptidase ErfK/SrfK from Escherichia fergusonii Becca

 Score =  191 bits (485), Expect = 2e-53
 Identities = 105/259 (40%), Positives = 151/259 (58%), Gaps = 8/259 (3%)

Query: 1   MLSRLSVVTCCLSLAALCAAGSASALQLPLPPPGEDIVGQVQVIKAKYEDT--FADLGTT 58
           M+ R++++    S A L A+ ++ A+  PLPP G  +VGQ   +     +T         
Sbjct: 1   MMRRVNILC---SFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQ 57

Query: 59  YDLGYSEMVAANPGVDAWLPGAGTEIVLPTRFILPPGPREGIVINLAEYRLYYFPKGQNV 118
           Y  G S M+ ANPG D +LP  G+++ +P + ILP   R+GIV+N+AE RLYY+P   N 
Sbjct: 58  YGQGLSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNT 117

Query: 119 VYTFPLGIGREGWGSPIAH-TSIIAKTPNPTWTPPASIKAEHAANGDPLPNVVPAGPDNP 177
           V  FP+GIG+ G  +P    T++  K   PTWTP  + + E+A  G+ LP  VPAGPDNP
Sbjct: 118 VEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNP 177

Query: 178 LGPFKFTLGTPGYLIHGSNMKFGIGTRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDAY 237
           +G +   +G   Y IHG+N  FGIG R S GC R+ N+++  +   VPVGT V+II+   
Sbjct: 178 MGLYAIYIGKL-YAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPV 236

Query: 238 KF-GRSGGKVYLEAHTPLN 255
           K+     G  +LE H PL+
Sbjct: 237 KYTTEPDGSKWLEVHEPLS 255