Pairwise Alignments

Query, 322 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 365 a.a., L,D-transpeptidase family protein from Dickeya dadantii 3937

 Score =  207 bits (528), Expect = 2e-58
 Identities = 128/322 (39%), Positives = 175/322 (54%), Gaps = 21/322 (6%)

Query: 8   VTCCLSLAALCAAGSASALQL--PLPPPGEDIVGQ-VQV-IKAKYEDTFADLGTTYDLGY 63
           +   L+L    AA S +AL +  PLP P   +VG+ +QV I +   D        Y +G 
Sbjct: 3   IRAILTLVVAAAAFSQTALAVVYPLPAPNSRLVGENIQVTIPSDSTDALEHFAAQYQMGL 62

Query: 64  SEMVAANPGVDAWLPGAGTEIVLPTRFILPPGPREGIVINLAEYRLYYFPKGQNVVYTFP 123
           S ++ ANPG+D +LP  G+ + +P + ILP  PREGIVIN AE RLYY+PKG   V   P
Sbjct: 63  SNLLEANPGIDVYLPKPGSTMTVPQQLILPDAPREGIVINSAEMRLYYYPKGSKTVVVLP 122

Query: 124 LGIGREGWGSPIAH-TSIIAKTPNPTWTPPASIKAEHAANGDPLPNVVPAGPDNPLGPFK 182
           +GIG+ G  +PI   TS+  K   PTWTP A++ AE+AA G+ LP V PAGPDNP+G + 
Sbjct: 123 IGIGQLGKDTPINWVTSVQRKKERPTWTPTAAMHAEYAARGEFLPQVYPAGPDNPMGLYA 182

Query: 183 FTLGTPGYLIHGSNMKFGIGTRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDAYKFG-R 241
             +G   Y IHG+N  FGIG R SHGC R+ + ++  +   VPVGT V+ IN+  K    
Sbjct: 183 LYIGNL-YAIHGTNANFGIGLRVSHGCVRLRDKDIKYLFDHVPVGTRVQFINEPVKATVE 241

Query: 242 SGGKVYLEAHTPLN------DDGTPSVVDKHTAVINALLKREDLANQLRVNWDQVRDVVA 295
             G  Y+E H PL+      +  TP  +    AV   L           V+   V   + 
Sbjct: 242 PDGSRYVEVHNPLSRTEEEFNSDTPVPLKLTPAVTKVLA-------DASVSESTVNQALQ 294

Query: 296 AEDGLPTEIGEPGAASVAVSAP 317
              G+PT++  P A +VA   P
Sbjct: 295 NRIGMPTKVNGP-AENVAPIEP 315