Pairwise Alignments

Query, 473 a.a., glycosylase from Pseudomonas simiae WCS417

Subject, 486 a.a., murein transglycosylase from Pseudomonas simiae WCS417

 Score =  129 bits (325), Expect = 2e-34
 Identities = 124/478 (25%), Positives = 208/478 (43%), Gaps = 56/478 (11%)

Query: 1   MIRPSALLMLCLTLLLPVAAVARLDGPLEVTKPGKVRDLAEIRSSRTLRVLVNQSRNSSG 60
           M  P+AL   C   L+       L   ++     K   L  I+    LRV+   S  +  
Sbjct: 1   MFSPTALRPRCAKWLIATGLFLMLSACVD-----KPSTLERIKEDGVLRVVTRNSPATYF 55

Query: 61  EVQGQAIGVEYHRLRAFEQYLNGHARDGQEINLKIIPKAKDQLLGALARGEGDLVAPGEL 120
           + +    G EY  ++ F   L          NL       D L G L +  G ++A   L
Sbjct: 56  QDRNGETGFEYELVKRFADDLGVKLEIETADNL-------DDLFGQLGKPNGPVLAAAGL 108

Query: 121 LDVKAAH-KISASDPIVSDVPLWLVGVKGERRFTKLEQLSGRTLALTTGSAAADAISQVN 179
           +  +    ++  S P +   P  ++   G+ R T    L G+ + +  GS  A+ ++++ 
Sbjct: 109 VSSEQRQTQVRFSHPYLEVTPQ-IIYRNGQSRPTNAADLVGKKIMVLKGSTHAEQLAELK 167

Query: 180 QKLALHKQPPVKVEWVDPTLAVEDVLEMVQAGIFHLTIVEKPIAERWSKILPKLR--FDK 237
           ++      P ++ E  D  + V D+L MV  G   LT+V+           P +R  FD 
Sbjct: 168 KQ-----NPAIEYEESD-AVEVVDLLRMVDEGQIDLTLVDSNEVAMNQVYFPNVRVAFD- 220

Query: 238 QVAISEPGDEYWFVR--QDASMLRASIDRFLKTYRTPADQDVAFQRIYRRLYQVRNPLAR 295
              +    ++ W V   +D S+L       + +Y    +++   QR+  R Y   + L  
Sbjct: 221 ---LGNASNQSWAVAAGEDNSLLNE-----INSYLDKVEKNGTLQRLKDRYYGHVDVLGY 272

Query: 296 VD--------RQRLEKLRPVLQKHAREQGMDWLNLAALAFKESALDPGARNSGGPTGLMQ 347
           V         +QRL K     + +A+ + +DW  LAA+ ++ES   P   +  G  GLM 
Sbjct: 273 VGAYTFAQHLQQRLPKYEKHFRAYAKAEKVDWRLLAAIGYQESLWQPAVTSKTGVRGLMM 332

Query: 348 ITPSAAQRVGVNNIESLDSNVQAGARYLAMIRRKFFASPKLNERERMAFVLAAYNMGPER 407
           +T + AQ +GV+N      ++  GA+YLA I+ +      + E +R  F LAAYN+G   
Sbjct: 333 LTQNTAQAMGVSNRLDPKQSIMGGAKYLAKIKDEL--DDSIAEPDRTWFALAAYNVGTGH 390

Query: 408 VQGMRTEAKRRGLNPNQWF---FQVERIAMEQ--------VGMGG--VSYVNSVNKYY 452
           ++  RT AKR GLNPN+W      + R++ +Q           GG  V +V ++ +YY
Sbjct: 391 LEDARTLAKREGLNPNKWLDVKKMLPRLSQKQWYSKTRYGYARGGEPVHFVANIRRYY 448