Pairwise Alignments

Query, 437 a.a., lipopolysaccharide biosynthesis protein RfbH from Pseudomonas simiae WCS417

Subject, 379 a.a., uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) from Escherichia coli BW25113

 Score =  146 bits (369), Expect = 9e-40
 Identities = 120/404 (29%), Positives = 191/404 (47%), Gaps = 33/404 (8%)

Query: 34  IPPSGKVIGARELQLMVEASLDGWLTTGRFNAEFEKKLAEFIGVKFLLSVNSGSSANLVA 93
           +P S   +G  EL  + E    GW+TTG  N   E+   +  G +  ++V+S ++   + 
Sbjct: 5   LPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHI- 63

Query: 94  FSTLTSPKLGERAIKKGDEVIGVAAGFPTTVNPIVQFGAIPVFVDVDMATHNINADLIEA 153
             TL + K+G     KGDEVI  +  + +T+N I   GA PV VDVD  T  +  + IE+
Sbjct: 64  --TLMALKIG-----KGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAIES 116

Query: 154 AITPKTKAIMLAHTLGNPFNLGKVKALCEKYNLWLVEDCCDALGATYDGKLVGTFGDIAT 213
           AITP+TKAI+  H  G P ++  ++A+ E+Y + ++ED   A+G  Y G+ +G  G  A 
Sbjct: 117 AITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKG-TAI 175

Query: 214 LSFYPAHHITMGEGGAVFTNNPML--KVIAESFRDWGRDCYCAPGCDNTCGDRFGQQYGS 271
            SF+   +IT  EGG + T+N  L  ++    F   G D Y          DR  Q +G 
Sbjct: 176 FSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAY----------DR--QTWGR 223

Query: 272 LPQGYDHKYVYAHLGYNLKITDMQAACGLAQLERAQDFIDTRKRNFALLKERLSSLSEFL 331
            PQ           GY   +TD+ AA  L QL +  + ++TR+R  A   ++  +   F 
Sbjct: 224 APQA-----EVLTPGYKYNLTDINAAIALTQLVKL-EHLNTRRREIAQQYQQALAALPFQ 277

Query: 332 EIAEATPNSDPSWFGFPVTLKES-SGVKRVDLLKYLDQHKIGTRLLFAGNLTRQPYFQNL 390
            ++        +W  F + + E   G+ R  L++ L +  IGT L F    T++ Y +  
Sbjct: 278 PLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERF 337

Query: 391 EYRVVGELTNTDRTMNQTFWLGVQPSLGQEHFDFVGEKLEEFFG 434
                  L NT+    +   L + P +     D V   L++  G
Sbjct: 338 P---TLSLPNTEWNSERICSLPLFPDMTTADADHVITALQQLAG 378