Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 196 a.a., RNA polymerase sigma factor SigX from Pseudomonas simiae WCS417

 Score = 66.6 bits (161), Expect = 3e-16
 Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 12/184 (6%)

Query: 9   SDEALLARYRTG---DSAAFEALYARHRQGLYRFLVSLSNKAELAEEIYQETWLSLIRSA 65
           SDE L+AR  T     + A+E L  R+++ L+            A+++ QE  L ++   
Sbjct: 17  SDEELVARSHTELFHVTRAYEELMRRYQRTLFNVCSRYLGNDRDADDVCQEVMLKVLYGL 76

Query: 66  TQPQGRASFRTWLFQIARNRLIDHWRKHGIHNPLHD--SYDEQLHAQADDSAGPEQQLSL 123
              +G++ F+TWL+ I  N  I  +RK      L D  S D    A  + +  PE     
Sbjct: 77  KNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPLEEASEEKAPAPE----- 131

Query: 124 SRDQARLDAALQGLPEDQREVFLLRLHGDLEVPQIAALTGTPLETVKSRLRYAQQKLRRL 183
             ++  LD  L  +    RE+ +LR   +LE  +IA +    L   K R + A  KLR  
Sbjct: 132 --EKGGLDRWLVYVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLREK 189

Query: 184 LAEE 187
            A E
Sbjct: 190 FAGE 193