Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 196 a.a., RNA polymerase sigma factor SigX from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 2e-15
 Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 9   SDEALLARYRTG---DSAAFEALYARHRQGLYRFLVSLSNKAELAEEIYQETWLSLIRSA 65
           +DE L+AR        + A+E L  R+++ L+            A+++ QE  L ++   
Sbjct: 17  TDEELVARSHEELYHVTRAYEELMRRYQRTLFNVCARYLGNDRDADDVCQEVMLKVLYGL 76

Query: 66  TQPQGRASFRTWLFQIARNRLIDHWRKHGIHNPLHD--SYDEQLHAQADDSAGPEQQLSL 123
              +G++ F+TWL+ I  N  I  +RK      L D  S D    A  D +  PE     
Sbjct: 77  KNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPVEEASEDKAPKPE----- 131

Query: 124 SRDQARLDAALQGLPEDQREVFLLRLHGDLEVPQIAALTGTPLETVKSRLRYAQQKLRRL 183
             ++  LD  L  +    RE+ +LR   +LE  +IA +    L   K R + A  KLR  
Sbjct: 132 --EKGGLDKWLVHVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLREK 189

Query: 184 LA 185
            A
Sbjct: 190 FA 191