Pairwise Alignments

Query, 884 a.a., DNA gyrase subunit A from Pseudomonas simiae WCS417

Subject, 923 a.a., DNA gyrase, subunit A from Pseudomonas putida KT2440

 Score = 1457 bits (3772), Expect = 0.0
 Identities = 766/927 (82%), Positives = 808/927 (87%), Gaps = 47/927 (5%)

Query: 1   MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
           MGELAKEILPVNIEDEL+QSYLDYAMSVIVGRALPDARDGLKPVHRRVL+AMSELGNDWN
Sbjct: 1   MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
           KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120

Query: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT 180
           RYTEVRMTKLAHELLADLHKETVDWVPNYDGTE IPAVMPT+IPNLLVNGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180

Query: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
           NIPPHNLGEVIDGCLALIDNPE+T+DELMQ+IPGPDFPTA IINGR GIIEAYRTGRGRI
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTIDELMQHIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240

Query: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
           YMRARS IEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKK+EGITELRDESDKD
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300

Query: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
           GMR+VIELRRGEVPEV+LNNLY QTQLQSVFGINVVAL+DGRPR+LNLKDLLEAFVRHRR
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360

Query: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
           EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEAL+STPWESSA
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA 420

Query: 421 VVAMVERAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ 480
           V  MVERAGADSCRPE L  QYGL +GKYFLSPEQAQAIL+LRLHRLTGLEHEKLLAEYQ
Sbjct: 421 VQVMVERAGADSCRPEDLPEQYGLHDGKYFLSPEQAQAILDLRLHRLTGLEHEKLLAEYQ 480

Query: 481 EILNQIGELIRILSSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER 540
           EIL QIGELIRILSSA RLMEVIREELE IRAEYGDVRRTEIL+A  DL  GDMIPEEER
Sbjct: 481 EILEQIGELIRILSSAERLMEVIREELEAIRAEYGDVRRTEILNASHDLNYGDMIPEEER 540

Query: 541 VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV 600
           VVTISHGGYAKTQPL+AYQAQRRGGKGKSATGVKDEDYI HLLVANSH TLLLFSSKGKV
Sbjct: 541 VVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFSSKGKV 600

Query: 601 YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPV------------EEYTE----- 643
           YW KTYEIPEASRAARGRPLVNLLPL+  E IT ML +            EE  E     
Sbjct: 601 YWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELDEAEDTV 660

Query: 644 --------------------------GHFIFMATAKGTVKKTPLESFSRQRSVGLIALEL 677
                                     G +IFMATA GTVKKTPL  F+R RS GLIAL+L
Sbjct: 661 LEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGLIALKL 720

Query: 678 DEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISML 737
            EGD LI+AAITDG +EVM+FSD GKV RF ES VR MGR ARGVRGM+L +GQ++ISML
Sbjct: 721 KEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQRIISML 780

Query: 738 IPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDRNGRLVGAVQVLDGEEIM 797
           IPE GSQILTASERG+GKRT +S+FP   RGGQGVIAM +  RNG L+GA+QV +GEEIM
Sbjct: 781 IPESGSQILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQEGEEIM 840

Query: 798 LISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERVQEPSEVEGEELEGEEFE 857
           LISDQGTLVRTRV EVSSL RNTQGVTLIKLA DE LVGLER+QEPSE E +E+   + E
Sbjct: 841 LISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERIQEPSEDELDEVIETDEE 900

Query: 858 GEVIAAGDDNVDEPTLDAAADEEEPQE 884
           G V A   DN +E   +AA  +E PQE
Sbjct: 901 G-VEAVAPDNENE---EAAGADEAPQE 923