Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  184 bits (466), Expect = 9e-51
 Identities = 150/518 (28%), Positives = 232/518 (44%), Gaps = 36/518 (6%)

Query: 8   LLAAATLTAWSLTAGLAQAAGVLTIGCREDSTTFDPIKSAQNRDTWVFAN-VYDTLVRVD 66
           LLAA  L    L    AQAA  L          FDP +     D    A  V++ L +  
Sbjct: 10  LLAAGLLACMPL----AQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFK 65

Query: 67  NLGTKMEPGLAESWDISKDGLTYTFKLRDAK-------FSDGSAITADDAAFSLLRIRDN 119
             GT++EPGLA SWDIS+DGLTYTF LRD         FS      ADD  F+  R+ D 
Sbjct: 66  RGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDA 125

Query: 120 KA---------SLWADPFNLINTAKASDP---KTLVVTLKTPAVAFLSQLASPTVSILSE 167
           ++         S +     L  T K+ D     T+   L     +F+  LA    S+ S 
Sbjct: 126 QSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSA 185

Query: 168 K---AMTKMGE-DAYSENPVTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSV 223
           +    + K G+ +  ++ PV +G F    ++K  ++    N  +W+ ++V LD + +   
Sbjct: 186 EYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAIT 245

Query: 224 TDDNTRMRMVQNNELDTAIFVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKP 283
            D  +R++ ++  E   + +   + +E +K+D N+ +          L  N  H  L + 
Sbjct: 246 PDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHPPLDQL 305

Query: 284 EVRQALDMAIDKQSLVKTATYGQGTVAYSYIPKGSLYHYANNLQRPYDPTAAKKLLEQAG 343
           +VRQALDMAIDK +++K      G +A + +P     +       PYDPT AK LL++AG
Sbjct: 306 KVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAKALLKEAG 365

Query: 344 AK-----DLKLNYVVNAGNEADEQIAVIIKDQLAKVGVTANLQKVDPTQSWQMLVDGEYD 398
                  +L    V  A N      A +I+    KVG+ AN+   +  +  +   +GE+D
Sbjct: 366 VAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAKNGEHD 425

Query: 399 ISVMYWTNDILDPDQ--KTTFVLGHDTNQNYMTRYKNDKVKALVAQARIEADPVKREQMY 456
             +  WT D  DPD      +        NY  ++ N     LV QA++  D  +R + Y
Sbjct: 426 AMIYGWTGDNGDPDNWLGVLYSCAAVKGSNY-AKWCNPAYDKLVQQAKVSNDREQRIKWY 484

Query: 457 VELQKLAKQDVNWIDLYYSPYINISRKNVSNFLQNPLG 494
            + QK+ K+ V    +  S      RK V +F  +P G
Sbjct: 485 QQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFG 522