Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 543 a.a., Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  177 bits (450), Expect = 6e-49
 Identities = 149/538 (27%), Positives = 242/538 (44%), Gaps = 53/538 (9%)

Query: 2   QSRHLKLLAAATLTAWSLTAGLAQAAGVLTIGCREDST-TFDPIKSAQNRDTWVFANVYD 60
           +SR L LLA   + A +L  G   A  +  + C E S   F P  +       V   VY+
Sbjct: 10  RSRSLALLAPTAIAALTLACGAVSAKTL--VYCSEGSPENFYPGMNTTGTSFDVTTQVYN 67

Query: 61  TLVRVDNLGTKMEPGLAESWDISKDGLTYTFKLR--------DAKFSDGSAITADDAAFS 112
           T+V  +  GTK+ PGLAE WDIS DG  YTF LR           F       ADD  F 
Sbjct: 68  TIVEFERGGTKVVPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFNADDFIFM 127

Query: 113 LLRIRDNKASLW--ADPF-----------------NLINTAKASDPKTLVVTLKTPAVAF 153
           L R        W  +DPF                  L+ T    D  T+ + L  P   F
Sbjct: 128 LER-------QWKESDPFFKVTSQNHSYFNDMGMPKLLKTVDRIDDYTVKIVLNQPEAPF 180

Query: 154 LSQLASPTVSILSEK---AMTKMG-EDAYSENPVTSGAFTVDEWRKGDRVILKKNPNFWQ 209
           L+ LA     I S++   AM K G  +   ++P+ +G F + +++K   +  K  P +W 
Sbjct: 181 LANLAMQYAGIQSKEYAIAMLKAGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQYWG 240

Query: 210 AKNVSLDGVEWVSVTDDNTRMRMVQNNELDTAIFVPFSRVEELKKDKNVVIHADPSTRED 269
            K   +D + +    D + R   +Q  E     +   + ++ ++KD NV +   P     
Sbjct: 241 GK-AKIDDLVFAITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVG 299

Query: 270 HLLINHEHGLLAKPEVRQALDMAIDKQSLVKTATYGQGTVAYSYIPKGSLYHYANNLQ-R 328
           +L  N          VR+A++MAI+K++++       G  A + IP  +++ Y + ++  
Sbjct: 300 YLSYNTTKKPFDDVRVRKAINMAINKKAIIDGVYLTTGVAAKNPIPP-TMWSYNDAVKDD 358

Query: 329 PYDPTAAKKLLEQAG-----AKDLKLNYVVNAGNEADEQIAVIIKDQLAKVGVTANLQKV 383
           PYDP AAKKLL QAG     + DL    V    N   ++IA +++  LAK+ V A ++  
Sbjct: 359 PYDPEAAKKLLAQAGYPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKSF 418

Query: 384 DPTQSWQMLVDGEYDISVMYWTNDILDPDQKTTFVLG----HDTNQNYMTRYKNDKVKAL 439
           +  +  + L  GE+ + ++ WT D  DPD     +LG       + + ++++     + L
Sbjct: 419 EWGEYRKRLQAGEHQMGMLGWTGDNGDPDNFLYTLLGCASAKSASGSNISKFCYQPYEDL 478

Query: 440 VAQARIEADPVKREQMYVELQKLAKQDVNWIDLYYSPYINISRKNVSNFLQNPLGRFT 497
           V +A+       R+ +Y + Q + K+   W  + ++  +   RK V +F  +P GR T
Sbjct: 479 VVKAKSTVKQADRDALYKKAQVIFKEQAPWFTIAHAVQLKPVRKEVVDFKLSPFGRHT 536