Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 512 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  181 bits (459), Expect = 5e-50
 Identities = 144/506 (28%), Positives = 250/506 (49%), Gaps = 21/506 (4%)

Query: 9   LAAATLTAWSLTAGLAQAAGVLTIGCREDSTTFDPIKSAQNRDTWVFANVYDTLVRVDNL 68
           L AA++TA +L A  A AA  + +    + TT DP  +       V  + Y  L  +D  
Sbjct: 10  LLAASVTA-ALAAAPAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDK- 67

Query: 69  GTKMEPGLAESWDISKDGLTYTFKLRDA-KFSDGSAITADDAAFSLLRIRDNKASLWADP 127
             K++  LAE + +S+DGL YT KLR   KF DG+   A+    +L R  + + SL    
Sbjct: 68  EMKLKNVLAEGYTVSEDGLVYTIKLRTGVKFQDGTDFNAEAVKVNLDRASNPENSL--KR 125

Query: 128 FNL---INTAKASDPKTLVVTLKTPAVAFLSQLASPTVSILSEKAMTKMGEDAYSENPVT 184
           +NL   I + +  DP T+ +TLK P  AF++ LA P  +++S  A+ K G++    +PV 
Sbjct: 126 YNLYKNIASTEVVDPATVKITLKEPFSAFINILAHPATAMISPAALKKYGKEI-GFHPVG 184

Query: 185 SGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSVTDDNTRMRMVQNNELDTAIFV 244
           +G + +  W + D V +KK   +WQ     LD + W  V D+NTR  M+Q  E   A  +
Sbjct: 185 TGPYELLTWNQTDFVKVKKFAGYWQQGLPKLDTITWRPVVDNNTRAAMLQTGEAQFAFPI 244

Query: 245 PFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKPEVRQALDMAIDKQSLVKTATY 304
           P+ +   L+K+  + + A PS  + ++ +N        P+VR+A++ AI++Q+LVK A  
Sbjct: 245 PYEQAAILQKNSKLELVASPSIMQRYISMNVTQKPFDNPKVREAINYAINRQALVKVAFA 304

Query: 305 GQGTVAYSYIPKGSLYHYANNLQR-PYDPTAAKKLLEQAGAKDLKLNYVVNAGNEADEQ- 362
           G  T A   +P      YA + Q  PYDP  A++LL++AG  +     + ++ N +  Q 
Sbjct: 305 GYATPATGVLPPA--IAYAQSYQPWPYDPAKARELLKEAGFPNGFSTTLWSSHNHSTAQK 362

Query: 363 IAVIIKDQLAKVGVTANLQKVDPTQ-SWQMLVDGEYDISV-MYWTNDILDPDQKTTFVLG 420
           +    + QLA+VG+   +  +D  Q + ++   G+ +  V M++T       +    +  
Sbjct: 363 VLQFTQQQLAQVGIKVQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWTASTGEADWALSP 422

Query: 421 HDTNQNY------MTRYKNDKVKALVAQARIEADPVKREQMYVELQKLAKQDVNWIDLYY 474
              +QN+         Y N +V   +A A     P ++ ++Y + Q +  ++  W+ L  
Sbjct: 423 LFASQNWPPTLFNTAFYSNPQVDKDLADALKTTKPEEKVRLYKDAQDIIWKESPWVPLVV 482

Query: 475 SPYINISRKNVSNFLQNPLGRFTLEE 500
              ++   K ++ F   P   F+ ++
Sbjct: 483 EKLVSAHNKALTGFYIMPDTGFSFDD 508