Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 510 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  181 bits (459), Expect = 5e-50
 Identities = 145/504 (28%), Positives = 233/504 (46%), Gaps = 17/504 (3%)

Query: 1   MQSRHLKLLAAATLTAWSLTAGLAQAA---GVLTIGCREDSTTFDPIKSAQNRDTWVFAN 57
           M++  L  L AATL   +L+A LA AA    +L IG   D  T DP  +  N D  V   
Sbjct: 1   MKTSLLSTLIAATL---ALSAPLALAAVPKDMLAIGKAADPQTLDPAITIDNNDWTVTYP 57

Query: 58  VYDTLVRVDNLGTKMEPGLAESWDISKDGLTYTFKLRD-AKFSDGSAITADDAAFSLLRI 116
            Y  LV+     T++E  L+  W  S+D   +TF L D AKFSDG+ +TA+    S  R+
Sbjct: 58  SYQRLVKYKPGSTEVEGDLSTGWKASEDQKEWTFTLADNAKFSDGTPVTAEAVKLSFERL 117

Query: 117 -RDNKASLWADPFNLINTAKASDPKTLVVTLKTPAVAFLSQLASPTVSILSEKAM-TKMG 174
            +  +    A P +L       D  T+  TL  P   FL  LA+   SI++   +     
Sbjct: 118 LKLGQGPSEAFPKDL--KIDVVDDHTVKFTLSQPFAPFLYTLANDGASIINPAVLKANAA 175

Query: 175 EDA---YSENPVTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSVTDDNTRMR 231
           +DA    ++N   SG F +  W+KG ++IL  NP+ WQ +      V    + +  +R  
Sbjct: 176 DDARGFLAQNTAGSGPFMLKSWQKGQQLILVPNPH-WQGEKPHFKRVSVKIIGESASRRL 234

Query: 232 MVQNNELDTAIFVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKPEVRQALDM 291
            +   +LD A  +P  ++  LK++  V +   PS R  +L +N+    L + ++R+A+  
Sbjct: 235 QLSRGDLDIADALPVDQLAALKQEGKVAVAEYPSLRVTYLYLNNGKTPLNQVDLRRAISW 294

Query: 292 AIDKQSLVKTATYGQGTVAYSYIPKGSLYHYANNLQRPYDPTAAKKLLEQAGAKDLKLNY 351
           A D Q +VK    G G      IP+G     A  +Q  +D   AK  LE+   K   L +
Sbjct: 295 ATDYQGMVKGILSGNGKQMRGPIPEGMWGFDATAMQYSFDEAKAKAALEKVKDKPASLTF 354

Query: 352 VVNAGNEADEQIAVIIKDQLAKVGVTANLQKVDPTQSWQMLVDGEYDISVMYWTNDILDP 411
           + +  +   E IA+  +  L K+G++  L+K+        +  G+YDI++  W+ D  DP
Sbjct: 355 LYSDNDPNWEPIALSTQASLGKIGISVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADP 414

Query: 412 DQKTTFVLGHDTN--QNYMTRYKNDKVKALVAQARIEADPVKREQMYVELQKLAKQDVNW 469
                +    D        + Y+N +V +L+  A    D  +R + Y + QK+   +  +
Sbjct: 415 YMFMNYWFESDKKGLPGNRSFYENKEVDSLLQAALKTTDQAERTKDYQQAQKVVIDEAAY 474

Query: 470 IDLYYSPYINISRKNVSNFLQNPL 493
           + L+   Y     K V  F  NP+
Sbjct: 475 VYLFQKNYQLAMNKEVKGFTFNPM 498