Pairwise Alignments

Query, 323 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 334 a.a., murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF from Escherichia coli ECOR38

 Score =  272 bits (695), Expect = 1e-77
 Identities = 155/324 (47%), Positives = 205/324 (63%), Gaps = 4/324 (1%)

Query: 3   LLQIKDLEVKFAAS-GTGLFGLNKQWVRAVNGVSLSLAAGETLGLVGESGSGKSTLGRAI 61
           LL+I DL+V F    G   F    + ++AV+GV+L L  GETLG+VGESG GKST  RAI
Sbjct: 11  LLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAI 70

Query: 62  LHLNPISAGQVLFDGIDMAHGSAIDITRLRHETAMIFQDPYAALNPRHTIGETIAEVLRV 121
           + L   + G V + G ++      +   +R +  MIFQDP A+LNPR TIGE IAE LR 
Sbjct: 71  IGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRT 130

Query: 122 QR-KVAPERISDRVNELLDLVGLRPELASRKPGSLSGGQCQRVGIARALAVEPRLIIADE 180
              K++ + + +RV  ++  VGL P L +R P   SGGQCQR+GIARAL +EP+LII DE
Sbjct: 131 YHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDE 190

Query: 181 CVAALDVSIQGQIINLLLELQQRMHLAILFIAHDLAIVRRLCDRVAVMYLGKIVEEGPVE 240
            V+ALDVSIQ Q++NLL +LQ+ M L+++FIAHDLA+V+ + DRV VMYLG  VE G  +
Sbjct: 191 PVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYD 250

Query: 241 SVFTAPRHPYTAALIQAIPEIDP--HRPLPTEPLPGEPPSPLNLPTGCAFHPRCRHARTM 298
            V+  P HPYT AL+ A+P  DP   +    + L GE PSP+N P+GC F  RC  A   
Sbjct: 251 EVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPE 310

Query: 299 CSVVLPPTHFLHEHRYSCVLEEPL 322
           C+   P       H  SC+  +PL
Sbjct: 311 CAKTRPVLEGSFRHAVSCLKVDPL 334