Pairwise Alignments

Query, 285 a.a., nickel ABC transporter permease from Pseudomonas simiae WCS417

Subject, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

 Score =  196 bits (499), Expect = 4e-55
 Identities = 104/263 (39%), Positives = 156/263 (59%), Gaps = 6/263 (2%)

Query: 25  AAWGLLILLAWLVLALFAPWIAPYDPIAQNTDFSLLGPS------LAHPFGTDNYGRDIL 78
           A  GLL +L  +  A+FAPW+AP++P  Q  DF L  P+      +    GTD  GRD+L
Sbjct: 33  AVAGLLFMLLIVFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEGGQMQFLLGTDELGRDLL 92

Query: 79  SRVIWGARIDLQLAIVGVIFPFMIGTFIGAVSGYIGGRFDSVCMRVIDVILAFPFLVLML 138
           SR+I G+R+ L + +  V+   + G  +G  +G+         MR++D++LA P L+L +
Sbjct: 93  SRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLGPTIMRLMDIMLALPSLLLAV 152

Query: 139 AIMAILGPGLKSFYIAMALVGWVSYARLIRSQILVLKESDFALAAKSLGFGHGRILFRHL 198
           AI+AILGPGL +  IA+A+V   SY RL R+ ++     D+  AA+  G G  R++F  +
Sbjct: 153 AIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFITV 212

Query: 199 LPNAMFGSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTMVAEGQAFITTAWWICTF 258
           LPN M   IV +       +L+ AA+ +LGLGVQPPT EWGTM+A  + +I  AWW+ + 
Sbjct: 213 LPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSL 272

Query: 259 PGLAIVTLAMGFSLLADGVAQVL 281
           PGL I+   +  +L+ DG+   L
Sbjct: 273 PGLTILLSVLAINLMGDGLRDAL 295