Pairwise Alignments

Query, 285 a.a., nickel ABC transporter permease from Pseudomonas simiae WCS417

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  209 bits (533), Expect = 5e-59
 Identities = 107/273 (39%), Positives = 169/273 (61%), Gaps = 1/273 (0%)

Query: 13  RLRFGLRNGRLTAAWGLLILLAWLVLALFAPWIAPYDPIAQNTDFSLLGPSLAHPFGTDN 72
           +L + L+   LT   G +I++  L++ +F+PW+A +DP A +    LL PS AH FGTD 
Sbjct: 22  KLVWMLKGSPLTVT-GAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDE 80

Query: 73  YGRDILSRVIWGARIDLQLAIVGVIFPFMIGTFIGAVSGYIGGRFDSVCMRVIDVILAFP 132
            GRD+ SRV+ G++  +   +V V    MIG+ +G +SG +GGR D++ MR++D++L+ P
Sbjct: 81  VGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIP 140

Query: 133 FLVLMLAIMAILGPGLKSFYIAMALVGWVSYARLIRSQILVLKESDFALAAKSLGFGHGR 192
            LVL +A+ A LGP L +  +A+A+V    Y RL R Q LV+++  +  AAK+ G     
Sbjct: 141 SLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWH 200

Query: 193 ILFRHLLPNAMFGSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTMVAEGQAFITTA 252
           ++  H+L N++   IV +  D    +L  A + ++GLG Q P+AEWG MVA G+ ++   
Sbjct: 201 LINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQ 260

Query: 253 WWICTFPGLAIVTLAMGFSLLADGVAQVLGDRS 285
           WW C FPG AI+  A+GF+L  DG+  +L  ++
Sbjct: 261 WWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKA 293