Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  209 bits (531), Expect = 9e-59
 Identities = 118/311 (37%), Positives = 177/311 (56%), Gaps = 3/311 (0%)

Query: 7   RFVLYRPLQLLPVLFGISLITFVLVRSIPGDPARALLGSRSTPDALLKIRAQYGLDQPLW 66
           RF+L +    +P L  IS++ F L+R IPGDPA  +LG  + P +L  +R   GLD  L 
Sbjct: 3   RFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHSLV 62

Query: 67  LQYFYFLKNLLKGDLGQSLLYKVDALKLIVTRIEPTLVLVLGSVVLALLIAVPLATFAAR 126
            Q+  + K +L  DLG S+  K   L LI+ R   +  +VL +V+ A LIAVP+   AA 
Sbjct: 63  TQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIAAW 122

Query: 127 NKGGWADNLIRVFTTVGLGMPAFWLGLMLILLLSVQWGLFPVSGY---GRTWLDKAHHMV 183
            +    D  +    T+ L +P+FWLGL+L+    +Q G  PV GY    +       +MV
Sbjct: 123 KQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMSYMV 182

Query: 184 LPCLTIALALSAVLVRNLRASMLMELQADHVTAARARGLLEAAVFRRHVLPNSLVPAVNL 243
           LP +T+ L     + R  RAS +  L+ +++  ARA+GL E AV  +H LPN+  P   L
Sbjct: 183 LPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTWTL 242

Query: 244 LAVNIGWLISGTVVIESLFAIPGIGQLLVRGIFTRDYMVVQGVAMVLACATVIVNFIADV 303
           + + +G L+ G  V+E++F +PGIG+L+V  IF RDY V+QG  +++    V+VN   D+
Sbjct: 243 VGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCVDL 302

Query: 304 VTVALDPRVKM 314
           +    DPRVK+
Sbjct: 303 LYPLFDPRVKL 313