Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  195 bits (496), Expect = 1e-54
 Identities = 110/332 (33%), Positives = 178/332 (53%), Gaps = 24/332 (7%)

Query: 8   FVLYRPLQLLPVLFGISLITFVLVRSIPGDPARALLGSRST-PDALLKIRAQYGLDQPLW 66
           F+  R   L+P  FGI+L+TF L+R IPGDP   ++G R   P+   +   + GL++PL 
Sbjct: 4   FIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLP 63

Query: 67  LQYFYFLKNLLKGDLGQSLLYKVDALKLIVTRIEPTLVLVLGSVVLALLIAVPLATFAAR 126
           +QY  ++  L +GDLG+SL  +    +  +T    TL L   +++ A ++ +     AA 
Sbjct: 64  VQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVIAAL 123

Query: 127 NKGGWADNLIRVFTTVGLGMPAFWLGLMLILLLSVQWGLFPVSGY--------------- 171
            +G   D+ +   +  G  MP FW GL+LI+  SV  G  PVSG                
Sbjct: 124 KRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTGFML 183

Query: 172 --------GRTWLDKAHHMVLPCLTIALALSAVLVRNLRASMLMELQADHVTAARARGLL 223
                      + D   H++LP + +     AV+ R  R+SML  L+ D++  ARA+GL 
Sbjct: 184 IDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAKGLS 243

Query: 224 EAAVFRRHVLPNSLVPAVNLLAVNIGWLISGTVVIESLFAIPGIGQLLVRGIFTRDYMVV 283
            A V   H L N+L+P + +  + +G L++G V+ E++F+ PGIG+ L+  I  RDY VV
Sbjct: 244 PARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVV 303

Query: 284 QGVAMVLACATVIVNFIADVVTVALDPRVKMQ 315
           Q   +++AC  ++VNF+ D++    +PR++ Q
Sbjct: 304 QNGILLIACLVILVNFVVDILYGLANPRIRHQ 335