Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 313 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  220 bits (561), Expect = 3e-62
 Identities = 113/305 (37%), Positives = 182/305 (59%), Gaps = 3/305 (0%)

Query: 12  RPLQLLPVLFGISLITFVLVRSIPGDPARALLGSRSTPDALLKIRAQYGLDQPLWLQYFY 71
           R L  +P L  +S++ F L + +PGDP  A+ G    P  + ++RA+  LD P+ +QYF+
Sbjct: 8   RLLLAVPTLLLVSMMVFGLQKLLPGDPLIAMAGEERDPAVIAQLRAELNLDAPIPVQYFH 67

Query: 72  FLKNLLKGDLGQSLLYKVDALKLIVTRIEPTLVLVLGSVVLALLIAVPLATFAARNKGGW 131
           +L   L+GDLG SL       +LI +++  TL L L ++++AL+  + +   AA NK  W
Sbjct: 68  WLTRALQGDLGVSLRTHEPVTQLIASKLPVTLELSLLAMIIALVFGISMGILAAVNKNSW 127

Query: 132 ADNLIRVFTTVGLGMPAFWLGLMLILLLSVQWGLFPVSGY---GRTWLDKAHHMVLPCLT 188
            D+        G+ +P FWLG++LIL+ SV     P SGY       +     ++LP   
Sbjct: 128 VDHGANFVAISGISIPHFWLGILLILVFSVNLQWLPASGYVPFSEDPIQNLRTLLLPASV 187

Query: 189 IALALSAVLVRNLRASMLMELQADHVTAARARGLLEAAVFRRHVLPNSLVPAVNLLAVNI 248
           +   L+A L+R+ RASM+  L+AD++  ARA+GLL  AV  +H   N+LVP + L  +  
Sbjct: 188 LGTGLAATLMRHTRASMIAVLKADYIRTARAKGLLPKAVILKHAFRNALVPVITLTTLLF 247

Query: 249 GWLISGTVVIESLFAIPGIGQLLVRGIFTRDYMVVQGVAMVLACATVIVNFIADVVTVAL 308
           G L+ G V+ E +F IPG G+++V  +F RDY VVQGV +++A   +++N +ADV+ V +
Sbjct: 248 GELLGGAVLTEQVFTIPGFGKMIVDSVFNRDYAVVQGVVLIVAIGFLMLNLLADVLYVLI 307

Query: 309 DPRVK 313
           +P+++
Sbjct: 308 NPKMR 312