Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 306 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  203 bits (516), Expect = 5e-57
 Identities = 102/306 (33%), Positives = 178/306 (58%), Gaps = 5/306 (1%)

Query: 8   FVLYRPLQLLPVLFGISLITFVLVRSIPGDPARALLGSRSTPDALLKIRAQYGLDQPLWL 67
           +V  R L L+P L  ++++ F+ V  +PGDPAR + G  +    +  +R Q GLDQPL++
Sbjct: 4   YVCKRLLGLIPTLLIVAVLVFLFVHMLPGDPARLVAGPEADATVIDLVRKQLGLDQPLYM 63

Query: 68  QYFYFLKNLLKGDLGQSLLYKVDALKLIVTRIEPTLVLVLGSVVLALLIAVPLATFAARN 127
           Q+ +++ N+L+GD G S++ +    + I +R  PT  L + S+  A++  +     AA  
Sbjct: 64  QFIHYICNVLQGDFGISMVSRRPVSEEIASRFMPTFWLTIASMCWAVVFGLGAGIIAAVW 123

Query: 128 KGGWADNLIRVFTTVGLGMPAFWLGLMLILLLSVQWGLFPVSGYGRTWLDKAHHMVLPCL 187
           +  W D L       G+  PAF LG++L+ + SV+ G  P  G   TW     H +LP +
Sbjct: 124 RNRWPDKLGMALAVTGISFPAFALGMLLMQIFSVELGWLPTVG-ADTW----KHYILPSM 178

Query: 188 TIALALSAVLVRNLRASMLMELQADHVTAARARGLLEAAVFRRHVLPNSLVPAVNLLAVN 247
           T+  A+SAV+ R  RAS +  L  D++  ARA+G+ E  V  +H   N+++P V ++ + 
Sbjct: 179 TLGAAVSAVMARFTRASFVDVLSEDYIRTARAKGVSEKWVILKHGFRNAMIPVVTMMGLQ 238

Query: 248 IGWLISGTVVIESLFAIPGIGQLLVRGIFTRDYMVVQGVAMVLACATVIVNFIADVVTVA 307
            G+L+ G++V+E +F  PG+G+LLV  +  RDY V+Q   ++ +   +++N + DV+  A
Sbjct: 239 FGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLVVDVLYAA 298

Query: 308 LDPRVK 313
           ++P ++
Sbjct: 299 INPAIR 304