Pairwise Alignments

Query, 307 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 294 a.a., Cyn operon transcriptional activator from Alteromonas macleodii MIT1002

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 30/288 (10%)

Query: 6   SLDVVDAVARHGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFVRRHRDVELTPAGRLF 65
           SL V  AV   GS S AA+ELH   SA+S  +R+LE  + + LF R  R + LT AGR++
Sbjct: 8   SLQVFVAVTDSGSMSVAARELHMTVSAISQQLRKLEHDIGLSLFNRNTRSLSLTEAGRIY 67

Query: 66  IDEARGVMKKMLGTRRLCQQ----VANGWSGQLKVAVDSIVKPQRCRQLVLDFYRQFPEV 121
            + +    K+ML T  L QQ    + +  +G++ +            + +     +FP++
Sbjct: 68  YETS----KQMLQTAELAQQKIESLQDDPTGKINIIAPEGFGGGLLSEPLKKLCEEFPKI 123

Query: 122 ELLLEYEVYNGVWDALADERTDIVIGATSAV----PVASHFTFRDMGLLNW--LCVVSAR 175
            + L           + DE  DI+  +   V    PV S   F  + L  W  +  VSA 
Sbjct: 124 TISL----------TVTDEPKDIIASSADLVLCFAPV-SDTNFSSLVLATWKRILCVSAD 172

Query: 176 HPLASVEGLLSDDQLRPFASLCMTDTSRNLPKRDT---WTLDNQRRLVVPNWASAIDCLR 232
           HPLA+ E L S + L     +        + K ++   + LD Q R+ V +  + I   +
Sbjct: 173 HPLAN-ETLTSPEALNAHTYIAHRHIEEYVMKHESEGEYELDTQ-RIDVNSMQTLIKLTQ 230

Query: 233 DGLCVGMAPAHQVLPWIERGELVALQLSRPFPASPSCVAWAQNKLSPA 280
           D +   + P  +V   ++ GE+  L      P         + +L PA
Sbjct: 231 DSVGYAVLPEPEVRHLLKFGEMKQLFTDWELPDYTVYAVTPKRELMPA 278