Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas simiae WCS417

Subject, 525 a.a., transposase from Pseudomonas simiae WCS417

 Score =  764 bits (1972), Expect = 0.0
 Identities = 375/519 (72%), Positives = 423/519 (81%), Gaps = 11/519 (2%)

Query: 1   MTSSPNLDQMTPEQLRALAEQAIQLLSQVD-----------SMGQKIHRLETVNEQLAHE 49
           M S P+LDQ+ PEQLRALA Q +Q +  +D           +MG+KIHR  TV E+L HE
Sbjct: 1   MISPPSLDQLNPEQLRALATQVMQRVETLDHQVDTLGKTVETMGRKIHRDRTVIEKLTHE 60

Query: 50  IAILKRHKFAKRSEQLSPDQGSLLDDLLDADIAAIEAELNAVNPRPAPTEPRQKPKRAPL 109
           IA LKR KFAKRSEQ SP Q  LLDDL+D DIAAIEAEL A+  +PA  E +QKPKR  L
Sbjct: 61  IAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIAAIEAELEALQAKPASIETKQKPKRTAL 120

Query: 110 PPKFPRTVIRHEPENTQCTCGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETL 169
           PP+FPRT+I HEP+NTQC CGC L+RIGEDVSEKLDYTPGVFTVE+H+RGKW C  CETL
Sbjct: 121 PPQFPRTLIHHEPDNTQCACGCALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETL 180

Query: 170 IQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLMIARSTLAQWVGQT 229
           IQAPVPAQ+IDKGIPTAGLLA VM+AK+ DHLPLYRQE+IFGRAGL I RSTLAQWVG  
Sbjct: 181 IQAPVPAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTC 240

Query: 230 GVQLQPLVDALREAVLAESVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALNAVVYD 289
           GVQLQPLVDALR  VL  +V+HADETPVQ+L PG KKTHRAYVWAY+++ F+ + AVVYD
Sbjct: 241 GVQLQPLVDALRGVVLGHNVVHADETPVQVLMPGAKKTHRAYVWAYASSAFADIKAVVYD 300

Query: 290 FSPSRAGEHARNFLGAWNGKLVCDDFAGYKAGFEKGMTEIGCMAHARRKFFDLHVANKSQ 349
           F+PSRAGEHAR FL  W GKLVCDDF GYKA F  G+TEIGCMAHARRKFF+LH  NKSQ
Sbjct: 301 FTPSRAGEHARRFLQDWKGKLVCDDFGGYKASFSLGVTEIGCMAHARRKFFELHATNKSQ 360

Query: 350 LAEQALHSIGGLYEVERQTRDMSDEDRWRIRQEKAAPIIATLHDWMLAQRDLVPNGSATA 409
           LAEQAL  I  LYE+ER+ RD+  + R RIRQEKAAP +  LH WM+AQR+ + +G A A
Sbjct: 361 LAEQALRYIQVLYEIEREVRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVAIA 420

Query: 410 KALDYSLKRWVALTRYLDDGAVPIDNNPVENQIRPWALGRSNWLFAGSLRSGKRAAAIMS 469
           KA DYSLKRW AL+RYLDDGAVPIDNN  E QIRPWALGR NWL+AGSLRSG+RAAA+MS
Sbjct: 421 KAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAALMS 480

Query: 470 LIQSARLNGHDPYAYLKDVLTRLPAQRASEIGQLLPHQW 508
           LIQSA+LNGHDPYAYLKDV TRLP QRASEI +LLPH W
Sbjct: 481 LIQSAKLNGHDPYAYLKDVFTRLPTQRASEIAELLPHNW 519