Pairwise Alignments

Query, 862 a.a., autotransporter from Pseudomonas simiae WCS417

Subject, 921 a.a., autotransporting virulence factor family member from Agrobacterium fabrum C58

 Score = 52.8 bits (125), Expect = 9e-11
 Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 34/265 (12%)

Query: 601 GLSSNMDQDGRGGDNGYSANSSGMAVGVDSRVNDTTTLG-------VAYSYLNSNIHSD- 652
           G ++ M  DG    + +  N  G+  G D    +T   G       V YS +N +I    
Sbjct: 657 GQNTEMKWDGTVSPS-FDGNLFGLQAGQDLLGRETEAGGFDRFGLFVGYSRMNGDIKGQA 715

Query: 653 LG------NKTDVEGHALSLYGNWS---LQNWFVDGSLSYGHNDNDSKRHIAGTTAKGSY 703
           LG       + D+ G +   Y  W+    Q W++D  L       D+    AG +   + 
Sbjct: 716 LGWNNLAVGEVDIGGTSFGAY--WTHVGAQGWYLDAVLMGTWFSGDATSR-AGESV--NI 770

Query: 704 DSNVLSASVIGGYSFKPSQAVVIEPRVAARYSNVRMEGYDEKGSSAALSTGSQRYEVGEL 763
           D + ++AS+ GGY    ++   +EP+    +  + ++   ++ SS A    S     G L
Sbjct: 771 DGSSVAASLEGGYPIALTEDWTLEPQAQIIWQKLSLDDEADRFSSVAFD--SDNAVTGRL 828

Query: 764 GAGVRLAGNLPMGAGSLQPEATLMAYHDLMGDRVAQTSSYML----GGSAFTVTGASVAR 819
           G  VRL GN    +G +QP      +H    D++ +  +  +    GG++  + G  VA 
Sbjct: 829 G--VRLQGNYQTDSGLIQPYLKANIWHGFSSDQMTRFDNDPIVTETGGTSLEIGGGLVAS 886

Query: 820 DSYEASVGVNYQVADFTVGASYTRQ 844
            + + SV   +   D+T      R+
Sbjct: 887 LTEKVSV---FATVDYTTNLGGERK 908



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 113/465 (24%), Positives = 173/465 (37%), Gaps = 92/465 (19%)

Query: 42  NESLVLTGQTTQVVDQNSTAAAGLGVANTHIQGSLINRADITLNADGRTIRGIALDPMYW 101
           N +L+L    T  V  N T   G G     I    IN         G  ++G   D    
Sbjct: 63  NNTLLLPSAGTGTVAGNVTF--GAGADRIEIYSGTIN---------GAVVQGDGSDAFVI 111

Query: 102 TGPQNLSPGSVTGNVEQAGIISMNNGGDEGMEIGKTVIGGSVINSGTIRSTPPSTPAPFP 161
           +G      G+VTGNV+Q       +G D+    G T+     +N G    T   +     
Sbjct: 112 SG------GAVTGNVQQ------GSGVDDFRMTGGTI---QSLNQGDNLDTFFMSDGRII 156

Query: 162 SFIGGGEGIYLHGTTIAGDVS---NTGLIDMAGEGAIGIILDRDNNTPTTIGGK--ILNS 216
                G+   + G  I G V+   +  + DM+G    GII   D N  T  G    IL+ 
Sbjct: 157 DAFDDGDVATMTGGRI-GRVNMKLDDNVFDMSG----GII---DRNLVTGFGNDTIILSG 208

Query: 217 GTVKATGEGAWGIEVETETSPLRIENSGLVSANGLGARGMLVYQGTFDYILNTGTIEGVG 276
           GT+      + G +  T T        G+V  + L + G       F++        G G
Sbjct: 209 GTIGGNISVSGGTDSVTVT-------GGVVGGSVLLSFG----NDRFNW-------NGSG 250

Query: 277 TDAGAFEFSGADFVQNSATGSRGIVNRGIIRADGTAISVNPADQVSTFEINQQAGEIRSN 336
              GA +  GAD   ++AT    + N  I     T IS        T    +  G  R +
Sbjct: 251 IIYGAIDL-GAD--DDTAT-LTNLANAHI--GATTQISGGLGTDSLTMSNVKTGGVARFD 304

Query: 337 SGTAIDAANLATLNWTGGNIIGD------VLNLNAVNIDGQAGFTGRRIIAPVS------ 384
           S   I+  N   L + G   +GD       L +++ +     G  GR  ++  S      
Sbjct: 305 SWETINLTNDTELVFDGTLTLGDSGTGTGTLTIDSASTVYGGGQNGR--VSAFSAGAFAN 362

Query: 385 -INSGSLNLSAPGTAITGNLNVAS---GAGIDMHLSDSVVPT----TPYLTVNGAANFAQ 436
            +NSG ++L+  G   +    V+    G G  + L D+V+ T    +  L ++G A    
Sbjct: 363 LVNSGRIDLTNGGGGASDTFTVSGNYVGNGGQIFL-DTVLGTDGSASDKLVIDGGAASGS 421

Query: 437 ASKLTVSANPGDFASTNSGTQYTLLQATSVQDNGLSVASSSALLN 481
                V+A      +T  G    ++QAT    NG + A  +  LN
Sbjct: 422 TGMNVVNAGGSGARTTADGIM--VVQAT----NGATTAGGAFALN 460