Pairwise Alignments

Query, 363 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 380 a.a., Phage (Mu-like) virion morphogenesis protein from Sphingobium sp. HT1-2

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 38/333 (11%)

Query: 29  QEKIAKKWAKEIEQQLKLSTGGDYIDPPKDATFEDLVSVYEEHVGGVKVFGKNKKAVLKS 88
           QE I     +  E++L L  G     P K+A    +  + EE   G K   +  + +   
Sbjct: 69  QEAIETLRTRAREERLDLPKGRKIAMPFKEAADSYIKRLEEE---GGKTIERKARTLELY 125

Query: 89  LKDKLGHVKLRAMSEAVVRDFVDRRVKEGAGGVTIGIDLAYMRTVLSWARYVRNLNLDPD 148
           L   LG   L  +S + +  +  +R K GA   TI  +LA +  + + A     +   P 
Sbjct: 126 LTPALGTKPLSKISSSDLAVYRTQRRKAGAKDATINRELAVVSHLFNKAIDWGWVTGKPK 185

Query: 149 ITLDVKRSLARRGLKTRSNE-RIRVASPGELAKLCEHYQRMKRNTIDMIAVIEFAVLTSL 207
           I            ++T+ +  RI   +P + A++    +      I    VI  A+ TS+
Sbjct: 186 I------------IRTKEDGGRIAYLTPDQCARVIAAARNDLSPHIYPFCVI--ALSTSM 231

Query: 208 RQEEICMLRIEDIDLERRVMLVRDRKHPTEKLGNHGE--VPVLDDFVEPITKAMSGRKTG 265
           R  E+  ++   +D ++R + +     P  K G   +     L DF++   +A+      
Sbjct: 232 RMSEVLSIQPAHLDFDKRRIFI-----PNAKAGQREQPMTGALADFLKAHLEALPDDAEW 286

Query: 266 RLFPYAPR------SVSASFTRACRALGI--DDLRFHDLRHTAATDLFTRELDIEAVSLF 317
            LFP A        ++  +  R  +A G+  D++  H  RHTA T L    +D+  V   
Sbjct: 287 -LFPNAASKSGRVTTIRKAHRRVVKAAGLNPDEVLRHTFRHTAITHLVQAGVDLPTVQKV 345

Query: 318 TGHKDWKMLRRYTHIKAESVHL----VERRKAL 346
           +GHK   M+ RY H   E ++     +ERR AL
Sbjct: 346 SGHKTLAMVARYAHANGEHINAAMDDLERRIAL 378