Pairwise Alignments

Query, 363 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 23/271 (8%)

Query: 86  LKSLKDKLGH--VKLRAMSEAVVRDFVDRRVKEGAGGVTIGIDLAYMRTVLSWARYVRNL 143
           L+SL D L H    L     + ++DF+  R++ G    +    L+ MR +  +    +  
Sbjct: 34  LRSLADWLAHHECSLLQAQPSDLQDFLAERLEGGYKATSSARLLSAMRRLFQYLYREKQR 93

Query: 144 NLDPDITLDVKRSLARRGLKTRSNERIRVASPGELAKLCEHYQRMKRNTIDMIAVIEFAV 203
             DP   L   + L +R  K  +  ++        A + +    ++       A++E   
Sbjct: 94  TDDPSAPLSSPK-LPQRLPKDLTEAQVDALLA---APVTDQPIELRDK-----AMLELLY 144

Query: 204 LTSLRQEEICMLRIEDIDLERRVMLVRDRKHPTEKLGNHGEVPV--LDDFVEPITK-AMS 260
            T LR  E+  L I D+ L + V+ V  + +  E+L   GE  V  L+ ++E      ++
Sbjct: 145 ATGLRVSELVGLTISDVSLRQGVVRVIGKGNK-ERLVPLGEEAVYWLEQYLEYSRPWLLN 203

Query: 261 GRKTGRLFPY--APRSVSASFTRACR------ALGIDDLRFHDLRHTAATDLFTRELDIE 312
           G+    LFP   A +    +F    +      ++  + L  H LRH  AT L     D+ 
Sbjct: 204 GQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSNKLSPHVLRHAFATHLLNHGADLR 263

Query: 313 AVSLFTGHKDWKMLRRYTHIKAESVHLVERR 343
            V +  GH D    + YTH+  E + L+ ++
Sbjct: 264 VVQMLLGHSDLSTTQIYTHVATERLRLLHQQ 294