Pairwise Alignments
Query, 2422 a.a., filamentous hemagglutinin from Pseudomonas simiae WCS417
Subject, 1508 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440
Score = 157 bits (396), Expect = 2e-41
Identities = 288/1188 (24%), Positives = 450/1188 (37%), Gaps = 191/1188 (16%)
Query: 57 GTTVGAAGNGVPVVNIATPNGSGLSHNQFKDYNVGPNGVILNNANGAVTNTQLGGYIVGN 116
GT V G+GVPV++I PN +GLSHNQF DYNV G++LNNA A +QL G + N
Sbjct: 43 GTPVIHNGHGVPVIDIVPPNATGLSHNQFIDYNVATPGLVLNNATAA-GQSQLAGALAAN 101
Query: 117 PNLKGGAASVILNEVNGGSPSQLRGYTEVAGQSAKVIVANPYGVTCSGCGFINTPNVTLT 176
P +G AAS ILNEV + S + G E+ G+ A I+ANP G+T +G FINT
Sbjct: 102 PQFQGQAASTILNEVISRNASLIEGPQEIFGRPADYILANPNGITLNGGSFINTTRAGFV 161
Query: 177 TGKP-----------VLDANGQLQRYQVDGGAVTIDGQGLNASNVDRFEIITRSAKINAQ 225
G P L A+G LQ V GQG NA E+I
Sbjct: 162 VGTPQFEEQQLRYLDTLTASGTLQ--------VLEYGQG-NAGGA--LELIAPRVDSKGL 210
Query: 226 INARE-LTVIAGRNDVDARTLNATPRADDGSTKPELAIDSSALGGMYAGAIKLVGTEAGV 284
+ A E L + GRN +D+R+ ST +ID+S G M AG I++V T G
Sbjct: 211 LMASETLDITVGRNRIDSRSGEVVEHLPSPST----SIDASLFGAMRAGRIRVVSTTEGA 266
Query: 285 GVKLDGTLAASGGDIQIDANGRLSMAQTQATGNVKVTAQNVDLTDKVYAAGNVQVTSAQA 344
GV++ + + I + G L ++ +G+ ++ K+ AA ++ + +
Sbjct: 267 GVRVGASQILGTEGVDISSAGGLHVS---GSGDRPTELRSERGVLKLTAADDLMLETVDG 323
Query: 345 LVNQKSVAAGQRIEIKATTVTNPGIIEAGVAPDNSRNTTGDLVVDAQTVNTTGNLLASRA 404
+ AG+++ + A T+ + + D+ V +T N +
Sbjct: 324 QAPRIEARAGKKLTLDAKTIEH-------IKHDSDSWNKKFWFVTRETYNRKTTTTHKQQ 376
Query: 405 LAITAAQALTNQGAIIQAKNVSVSSAKLTNQGATARLFGEQALTVDAPAIVNLGGLIRFG 464
+Q L + ++Q S ++T A++ LTVD+ A GL
Sbjct: 377 ---QGSQLLGTESVLLQ----SGDDMRMT----AAKVDAGNELTVDSGA-----GL---- 416
Query: 465 DGQAATLTSASLDNRQGRIEMAGGSLVLDSRELNNNGGQVVANQLTVNAG-NLNNQNGVL 523
D A + + + R ++ G D + G + A +++ A NLN Q L
Sbjct: 417 DILAGIDSKRTEQQVRHRKDLWRGDSDSDQLKETAKGSTLSAGHMSIKASDNLNVQGSSL 476
Query: 524 LA-------------GVTTVNATNLDNSLKGLI--------QADNGALNLTVANAFNNNQ 562
+ G TT+ +G + + N VA + +
Sbjct: 477 HSRSDLAIQAKQADIGTTTLQEHGTQRDYRGDLVSGTFFGDRKGNDTEGQVVAGSTITSD 536
Query: 563 GFAQASTD-LSLNAGTLSSNANGVLSANTGKLTLVTAQQLNNAQGRLQAGQ--GNVELHA 619
G S D +++ T+ + VL + G L + + R + G +
Sbjct: 537 GELTVSADQVTIKGSTVFGKQDAVLYSENGSLAIEADHGSTTSTQRTSDSKLFGLIGSKH 596
Query: 620 ANLDNQSGVIV----GKQLLLDVNAGDIDNRAGRV-LGDKLDVRASGLDNRNAGLLAGGA 674
+ D + V+V L +A ++ + +V G L V A G LL G A
Sbjct: 597 ESTDRKQQVLVSDVSSTSNLRLASAEEMRIQGAKVEAGKHLQVEAKG------DLLIGSA 650
Query: 675 EGVSLLLKGPGQLLNAQGRIQSEGLLQLQGERLDNSAGILLGKTVDVTAQRFTN----SN 730
+ V Q Q++ + E +AG+ + QR TN
Sbjct: 651 QSVDERETRDQQRGFTANARQTQEAEDGKPESRQYAAGVAYEVVTSTSKQRTTNQVASEL 710
Query: 731 KGALVS---------DGGDITFNVSDLLTNVDGVIDAGERNLLVKALTTLNNDGG-TLRG 780
KGA V +G + DL V RN A +T + GG T+ G
Sbjct: 711 KGASVGMNSSAHLQVNGSKVQATAGDLDVQAREVTLGATRNDRDVATSTTESGGGLTVTG 770
Query: 781 KRLDIAAQYLNNDNGQLLAGNLGLGYSGQSVTNRKGLILSGGAHTELDTASLDNQGGTVQ 840
+ + + + N ++ A S R L SG D A L
Sbjct: 771 GIDRLGSLFEGHHNREVQADR-------DSKVQRSELQASGDLKLRSD-ALLTEAAHVEA 822
Query: 841 GDTLTVTADKADN---------------GSGGLMASL-LGDLQLTVEALTNRGGKLFGKE 884
G+TL VTA + DN SG L AS+ DL +E L + G+E
Sbjct: 823 GNTLQVTAKRIDNRAAQDTHEHEQSRDDWSGSLGASIEYRDLTRPIERL------VLGEE 876
Query: 885 QVTVSGATLDNSASGQISGNVLNLTSRATLTNQ----GGLIEANQGLTLVGGNLDNSAGG 940
A+ +++ + G + + L NQ + E + V + G
Sbjct: 877 APRFQQASPEDAMAPPSVGADMTVEHLKRLENQRRGIAQVSELSAAKVEVKADTLADQGT 936
Query: 941 QVRALGGANSSLDFSDQLNNQNGTLEFASQAL------RLDTANLNNQGGMLQHAGSGLF 994
RA G+ Q++ T E Q L RLDT+ + G L
Sbjct: 937 AWRANAGSLKIEAQQHQVSAAENTQETTVQRLAYGGDARLDTSTGEDLNVRAAGKGGSLD 996
Query: 995 HINTAGLT---------------GSQGNIQGMGTADWAFGKVV--SLGRVQLNEVLTYKS 1037
+TA GS G +G D G VV S G + L +
Sbjct: 997 KKDTASTAVPGSLYGQQGIQVQLGSDGRYEG-ARIDGGEGSVVMHSAGSLALPQATDKAE 1055
Query: 1038 AQGLTL------KAGDRMAS----GKGLILDVASLDNGG-----ELLSDGDLSITTTGDI 1082
Q L K G+R S G+G + L G ++ + G++ +T+TGD+
Sbjct: 1056 QQSRQLDGNAWAKVGNRPGSTGVDGRGYLDHGQKLSTQGKAQVAQIDAKGEVKLTSTGDL 1115
Query: 1083 TNSGRVSALQNLSVTANNLS-QNGGRL---AGSHTQ----LNLGGTLD 1122
G + + + A ++ Q+GG+L A S+TQ NLGG ++
Sbjct: 1116 LLEG--TRIGSREAKAGDIQVQSGGQLQVKAASNTQQATGSNLGGGME 1161
Score = 54.3 bits (129), Expect = 2e-10
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 45/329 (13%)
Query: 1746 TLRDSGAGTIVARENLAMDAHRDLTNRGALV-AGNDASLVAGRDLNLVAASDTS-----V 1799
T + ++ E++ + + D+ A V AGN+ ++ +G L+++A D+ V
Sbjct: 372 THKQQQGSQLLGTESVLLQSGDDMRMTAAKVDAGNELTVDSGAGLDILAGIDSKRTEQQV 431
Query: 1800 KHEFSDGGHKSSITTDVKNLAATVT-AGGNLNMKAGQDVNIIGSNATAGKDMNVQAVRDF 1858
+H D S + +K A T + G++++KA ++N+ GS+ + D+ +QA +
Sbjct: 432 RHR-KDLWRGDSDSDQLKETAKGSTLSAGHMSIKASDNLNVQGSSLHSRSDLAIQAKQ-- 488
Query: 1859 NVVSVGDTHNVE-GREKDGKKRI---------KTSDEQTTQVA-SVLTAGRDFTSQAGRD 1907
+G T E G ++D + + K +D + VA S +T+ + T A +
Sbjct: 489 --ADIGTTTLQEHGTQRDYRGDLVSGTFFGDRKGNDTEGQVVAGSTITSDGELTVSADQ- 545
Query: 1908 TTLVASKISAGNEAYLYSDRRLGLLA------GQNSAYTLYDMKKNSGWGSKQTRRDEVT 1961
T+ S + +A LYS+ G LA S D K GSK D
Sbjct: 546 VTIKGSTVFGKQDAVLYSEN--GSLAIEADHGSTTSTQRTSDSKLFGLIGSKHESTDRKQ 603
Query: 1962 RVTHVGSEINAGGDIGLISGSDQLYQRAKLTSGKDVNILSGGSVTFEAVKDLHQESHTKS 2021
+V + S++++ ++ L S + Q AK+ +GK + + + G + + + + +
Sbjct: 604 QV--LVSDVSSTSNLRLASAEEMRIQGAKVEAGKHLQVEAKGDLLIGSAQSVDERE---- 657
Query: 2022 KSDLAWTSSSGRGNTDETLRQTQIVAQGK 2050
T RG T RQTQ GK
Sbjct: 658 ------TRDQQRGFT-ANARQTQEAEDGK 679
Score = 48.1 bits (113), Expect = 1e-08
Identities = 110/453 (24%), Positives = 176/453 (38%), Gaps = 65/453 (14%)
Query: 1588 LMDNALA---SKDALRLSVGVTLTSQQVGALTHDIVWMENRVVDGQTVLV--PVLY-LAQ 1641
+++NA A S+ A L+ Q + ++++ +++G + P Y LA
Sbjct: 82 VLNNATAAGQSQLAGALAANPQFQGQAASTILNEVISRNASLIEGPQEIFGRPADYILAN 141
Query: 1642 AESRNVRGNSLIQGRDLNLVTGGDLVNVGTLRASNNLSAASTGGSIYTGGLIEAGNNLSL 1701
+ G S I V G LR + L+A+ T + G AG L L
Sbjct: 142 PNGITLNGGSFINTTRAGFVVGTPQFEEQQLRYLDTLTASGTL-QVLEYGQGNAGGALEL 200
Query: 1702 LADDSIRNAMAGEIRGKQVSLATLKGDITNDTTAIQVRDGAGMRTLRDSGAGTIVARENL 1761
+A + K + +A+ DIT I R G + L S + +I A
Sbjct: 201 IAP---------RVDSKGLLMASETLDITVGRNRIDSRSGEVVEHL-PSPSTSIDASLFG 250
Query: 1762 AMDAHRDL---TNRGALVAGNDASLVAGRDLNLVAASDTSVKHEFSDGGHKSSITTDVKN 1818
AM A R T GA V + ++ +++ +A H G + + ++
Sbjct: 251 AMRAGRIRVVSTTEGAGVRVGASQILGTEGVDISSAGGL---HVSGSGDRPTELRSERGV 307
Query: 1819 LAATVTAGGNLNMKAGQDVNIIGSNATAGKDMNVQAVRDFNVVSVGDTHNVE----GREK 1874
L T L GQ I A AGK + + A ++ D+ N + RE
Sbjct: 308 LKLTAADDLMLETVDGQAPRI---EARAGKKLTLDAKTIEHIKHDSDSWNKKFWFVTRET 364
Query: 1875 DGKKRIKTSDEQTTQVASVLTAGRDFTSQAGRDTTLVASKISAGNEAYLYSDRRLGLLAG 1934
+K T +Q S L Q+G D + A+K+ AGNE + S L +LAG
Sbjct: 365 YNRKTTTTHKQQQ---GSQLLGTESVLLQSGDDMRMTAAKVDAGNELTVDSGAGLDILAG 421
Query: 1935 QNSAYTLYDMKKNSGWGSKQTRRDEVTRVTHVGSEINAGGDIGLISGSDQLYQRAKLTSG 1994
+S T ++ R ++ R GD S SDQL + AK ++
Sbjct: 422 IDSKRTEQQVR----------HRKDLWR-----------GD----SDSDQLKETAKGST- 455
Query: 1995 KDVNILSGGSVTFEAVKDLH-QESHTKSKSDLA 2026
LS G ++ +A +L+ Q S S+SDLA
Sbjct: 456 -----LSAGHMSIKASDNLNVQGSSLHSRSDLA 483
Score = 45.1 bits (105), Expect = 9e-08
Identities = 106/454 (23%), Positives = 172/454 (37%), Gaps = 61/454 (13%)
Query: 1634 VPVLYLAQAESRNVRGNSLIQGRDLNLVTGGDLVNVGTLRASNNLSAASTGGSIYTGGLI 1693
VPV+ + + + N I D N+ T G ++N T + L+ A + G
Sbjct: 53 VPVIDIVPPNATGLSHNQFI---DYNVATPGLVLNNATAAGQSQLAGALAANPQFQGQAA 109
Query: 1694 EAGNNLSLLADDSIRNAMAGEIRGKQVSLATLKGDITNDTTAIQVRDGAGMRTLRDSGAG 1753
++L + RNA I G Q I + I + G+ + T R AG
Sbjct: 110 S-----TILNEVISRNASL--IEGPQEIFGRPADYILANPNGITLNGGSFINTTR---AG 159
Query: 1754 TIVARENLAMDAHR---DLTNRGALVAGNDASLVAGRDLNLVAASDTSVKHEFSDGGHKS 1810
+V R LT G L AG L L+A S G +
Sbjct: 160 FVVGTPQFEEQQLRYLDTLTASGTLQVLEYGQGNAGGALELIAPRVDS------KGLLMA 213
Query: 1811 SITTDVKNLAATVTAGGN-LNMKAGQDVNIIGSNATAGKDMNVQAVRDFNVVSVGDTHNV 1869
S T D+ T G N ++ ++G+ V + S +T+ D ++ F + G V
Sbjct: 214 SETLDI-------TVGRNRIDSRSGEVVEHLPSPSTS-IDASL-----FGAMRAGRIRVV 260
Query: 1870 EGREKDGKKRIKTSDEQTTQVASVLTAGRDFTSQAGRDTTLVAS-----KISAGNEAYLY 1924
E G R+ S T+ + +AG S +G T + S K++A ++ L
Sbjct: 261 STTEGAGV-RVGASQILGTEGVDISSAGGLHVSGSGDRPTELRSERGVLKLTAADDLMLE 319
Query: 1925 S----DRRLGLLAGQN---SAYTLYDMKKNS-GWGSK--------QTRRDEVTRVTHVGS 1968
+ R+ AG+ A T+ +K +S W K R+ T GS
Sbjct: 320 TVDGQAPRIEARAGKKLTLDAKTIEHIKHDSDSWNKKFWFVTRETYNRKTTTTHKQQQGS 379
Query: 1969 EINAGGDIGLISGSDQLYQRAKLTSGKDVNILSGGSVTFEA-VKDLHQESHTKSKSDLAW 2027
++ + L SG D AK+ +G ++ + SG + A + E + + DL W
Sbjct: 380 QLLGTESVLLQSGDDMRMTAAKVDAGNELTVDSGAGLDILAGIDSKRTEQQVRHRKDL-W 438
Query: 2028 TSSSGRGNTDETLRQTQIVAQGKFAIQAVDGLKV 2061
S ET + + + A G +I+A D L V
Sbjct: 439 RGDSDSDQLKETAKGSTLSA-GHMSIKASDNLNV 471
Score = 28.9 bits (63), Expect = 0.007
Identities = 58/286 (20%), Positives = 108/286 (37%), Gaps = 44/286 (15%)
Query: 1667 VNVGTLRASNNLSAASTGGSIYTGGLIEAGNNLSLLADDSIRNAMAGEIRGKQVSLATLK 1726
V V + +++NL AS G +EAG +L + A + A + ++ + +
Sbjct: 605 VLVSDVSSTSNLRLASAEEMRIQGAKVEAGKHLQVEAKGDLLIGSAQSVDERE-TRDQQR 663
Query: 1727 GDITNDTTAIQVRDGAGMRTLRDSGAGTIVARENLAMDAHRDLTN------RGALVAGND 1780
G N + D G R AG VA E + + + TN +GA V N
Sbjct: 664 GFTANARQTQEAED--GKPESRQYAAG--VAYEVVTSTSKQRTTNQVASELKGASVGMNS 719
Query: 1781 ASL----------------VAGRDLNLVAA-SDTSVKHEFSDGGHKSSITTDVKNLAATV 1823
++ V R++ L A +D V ++ G ++T + L +
Sbjct: 720 SAHLQVNGSKVQATAGDLDVQAREVTLGATRNDRDVATSTTESGGGLTVTGGIDRLGSLF 779
Query: 1824 TAGGNLNMKAGQDVNIIGSNATAGKDMNVQA---VRDFNVVSVGDTHNVEGREKDGKKRI 1880
N ++A +D + S A D+ +++ + + V G+T V + D +
Sbjct: 780 EGHHNREVQADRDSKVQRSELQASGDLKLRSDALLTEAAHVEAGNTLQVTAKRIDNRAAQ 839
Query: 1881 KTSDEQTTQVASVLTAGRDFTSQAG-----RDTTLVASKISAGNEA 1921
T + + ++ D++ G RD T ++ G EA
Sbjct: 840 DTHEHEQSR--------DDWSGSLGASIEYRDLTRPIERLVLGEEA 877