Pairwise Alignments

Query, 229 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 248 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  163 bits (412), Expect = 3e-45
 Identities = 93/204 (45%), Positives = 121/204 (59%), Gaps = 5/204 (2%)

Query: 24  QAASEDDPWESVNRPIFTFNDTVDTYALKPLAQGYQFVTPQFVQDGIHNFFRNIGDVGNL 83
           QA +  DP ES+NR I+ FN  +D + L PL  GYQ+VTP FV+ G+ NFF N+GDV NL
Sbjct: 45  QALNVYDPLESINRRIYHFNYRLDQWVLLPLVNGYQYVTPSFVRTGVSNFFNNLGDVPNL 104

Query: 84  ANNVLQLKPHNAGVDTARLLVNTTFGVLGFIDVGTKMGLQRSDEDFGQTLGYWGVGSGPY 143
            N+VLQLK   +   TARL+ NT  GV G  D  T MGL R  EDFGQTLG++GV  GPY
Sbjct: 105 FNSVLQLKAKRSAEITARLMFNTIIGVGGLWDPATSMGLPRQSEDFGQTLGFYGVPDGPY 164

Query: 144 VMLPLLGPSTLRDAPSKYVD-SYTQPYRYMNDIGWRN---STFGLNIVDTR-ASLLDSEK 198
           +MLP+LGPS LRD     VD +  Q   Y+N           F L +VD R  +     +
Sbjct: 165 LMLPVLGPSNLRDTTGLVVDYAGEQAVNYLNVAEASTDHPEIFALRVVDKRYTTKFRYGQ 224

Query: 199 LITGDKYTFIRNAYLQNREFKVKD 222
           L +  +Y  +R  Y Q R+ ++ +
Sbjct: 225 LNSPFEYEKVRYVYTQARKLQIAE 248