Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Pseudomonas simiae WCS417

Subject, 691 a.a., ATP-dependent DNA helicase RecG from Pseudomonas simiae WCS417

 Score =  241 bits (616), Expect = 1e-67
 Identities = 182/495 (36%), Positives = 258/495 (52%), Gaps = 31/495 (6%)

Query: 494 RYLGLQTLEI--DNQAAEFLTMEYAEGAKLYVPVANLHLIARYTGSDDALAPLHRLGSET 551
           R L +QTL +       ++L +E A   +L    A+L    RY     A A +  L    
Sbjct: 162 RQLCMQTLTMLGPKSLPDWLPLELARDYQL----ASLDDAIRYLHHPPADADVDELALGH 217

Query: 552 WQKAKRKAAEQVRDVAAELLDIYARRAAREGYAFADPKADY--ATFSAGFAFEETPDQQT 609
                R A E++  +  +L     R + R   A A PKA    A + A   F  T  QQ 
Sbjct: 218 HWAQHRLAFEEL--LTHQLSQQRLRESMRSLRAPAMPKATRLPAQYLANLGFAPTGAQQR 275

Query: 610 TIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHGGKQVAILVPTTLLAQQHYN 669
               +  D+   +PM RL+ GDVG GKT VA  AA  A+  G QVA++ PT +LA+QH+ 
Sbjct: 276 VGNEIAYDLSQQEPMLRLIQGDVGAGKTVVAALAALQALEAGYQVALMAPTEILAEQHFI 335

Query: 670 SFRDRFADWPVTVEVMSRFKSAKEVNAAIADLAEGKIDIVIGTHKLLSDDVKIKNLGLVI 729
           +F+       + V  ++     K   AA+  +A G   +V+GTH L  D+V+ KNL LVI
Sbjct: 336 TFKRWLEPLGLEVAWLAGKLKGKNRAAALEQIAGGA-QMVVGTHALFQDEVQFKNLALVI 394

Query: 730 IDEEHRFGVRQKEQLKAL----RSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARR 785
           IDE+HRFGV+Q+  L+      R     L +TATPIPRTL M+     D SI+   P  R
Sbjct: 395 IDEQHRFGVQQRLALRQKGVGGRMNPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGR 454

Query: 786 LSVRT-FVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEK--CAA------DLAELVP 836
             V T  V +  +  V E +      G Q Y++   ++  E+  C A      DL   + 
Sbjct: 455 TPVNTVLVTDTRRVEVIERVRGACAEGRQAYWVCTLIEESEELTCQAAETTYEDLTSALG 514

Query: 837 EARIAIGHGQMRERELEQVMSDFYHKRFNVLIASTIIETGIDVPSANTIIIERADKFGLA 896
           E ++ + HG+M+  E   VM+DF      +L+A+T+IE G+DVP+A+ +IIE  ++ GLA
Sbjct: 515 ELKVGLIHGRMKPAEKAAVMADFKAGNLQLLVATTVIEVGVDVPNASLMIIENPERLGLA 574

Query: 897 QLHQLRGRVGRSHHQAYAYLL-TPPRQQITSDAEKRLEAIANTQDLGAGFVLATNDLEIR 955
           QLHQLRGRVGR    ++  LL  PP  QI     +RL  +  T D   GFV+A  DLE+R
Sbjct: 575 QLHQLRGRVGRGSAASHCVLLYHPPLSQI---GRQRLGIMRETND---GFVIAEKDLELR 628

Query: 956 GAGELLGDGQSGQIQ 970
           G GE+LG  Q+G +Q
Sbjct: 629 GPGEMLGTRQTGLLQ 643