Pairwise Alignments

Query, 873 a.a., DNA topoisomerase I from Pseudomonas simiae WCS417

Subject, 869 a.a., DNA topoisomerase I from Pseudomonas putida KT2440

 Score = 1621 bits (4197), Expect = 0.0
 Identities = 799/870 (91%), Positives = 831/870 (95%), Gaps = 1/870 (0%)

Query: 1   MGKSLVIVESPAKAKTINKYLGNEYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE 60
           MGKSLVIVESPAKAKTINKYLGN+YVVKSSIGHIRDLPTSGSASASKEPAAKRGKAA GE
Sbjct: 1   MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAA-GE 59

Query: 61  GPVLTPKEKARKQLVSRMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD 120
            P L+PKEKAR+QLV+RMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
Sbjct: 60  APALSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD 119

Query: 121 REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSKPGELDIDRVNAQQARRFLDR 180
           REGEAIAWHLREAIGGDD+RYKRVVFNEITKKAIQEAFS+PGELDIDRVNAQQARRFLDR
Sbjct: 120 REGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDR 179

Query: 181 VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEVHADLGTAKGAN 240
           VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWE+HADLGTAK A 
Sbjct: 180 VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIHADLGTAKNAK 239

Query: 241 VRFEVAREKGEAFKPLNEAQAMAALEKLKSSSYSIVKREDKPTSSKPSAPFITSTLQQAA 300
           VRFEVAREKGEAFKPLNEAQAMAALEKLK+SSYS+VKRED+PTSSKPSAPFITSTLQQAA
Sbjct: 240 VRFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAA 299

Query: 301 SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSVDAVAMARTYIEEEFGKKYLPEKPN 360
           SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLS DA+ MAR+YIE EFGK+YLPE P 
Sbjct: 300 SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALDMARSYIEREFGKQYLPEAPL 359

Query: 361 VYSSKEGAQEAHEAIRPSDANTTPAKLSGMERDAERLYELIWRQFLACQMLPAQYLSTTV 420
           VY SKEGAQEAHEAIRPSD NT P KLSGMERDAERLYELIWRQFLACQM PAQYLST+V
Sbjct: 360 VYGSKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSV 419

Query: 421 TVAASDFELRAKGRILKFDGYTRVMPQIAKPGDDDVLPDMAQGDTLKLITLDPSQHFTKP 480
           TVAA DFELRAKGRILKFDGYTRV+PQ +KPG+DDVLP+M QG+ LKLI +DPSQHFTKP
Sbjct: 420 TVAAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKP 479

Query: 481 PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLSES 540
           PAR++EASLVKEMEKRGIGRPSTYAAIISTIQDRGYV LHNRRFYSEKMGDIVTERLSES
Sbjct: 480 PARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSES 539

Query: 541 FSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAESPESGMRANQPVMT 600
           FSNLMDYGFTA MEENLDDVAQGERDWKNVLDEFYGDF KKL+ AES E GMRANQP MT
Sbjct: 540 FSNLMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESSEDGMRANQPTMT 599

Query: 601 DIPCQTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL 660
           +IPC+ CGRPM IRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESES VL
Sbjct: 600 NIPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESRVL 659

Query: 661 RGKHRCPICSTAMDAYLLDEKHKLHICGNNPDCNGYEIEEGTYRIKGYEGPSLECDKCGS 720
            GKHRCPIC+TAMDAYLLDEKHKLHICGNNPDC GYEIEEG YRIKGYEGPSLECDKCGS
Sbjct: 660 LGKHRCPICATAMDAYLLDEKHKLHICGNNPDCVGYEIEEGNYRIKGYEGPSLECDKCGS 719

Query: 721 EMQLKTGRFGKFFGCTNPTCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA 780
           EMQLKTGRFGKFFGCTNP CKNTRKLLKSG+AAPPKMD V MPELKCEKV+DTY+LRDGA
Sbjct: 720 EMQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGA 779

Query: 781 SGLFLAASQFPKNRETRAPLVLEIVPHKDEIDPKYHFLCEAPKKDPDGRPAVIRYSRKTK 840
           SGLFLAASQFPKNRETRAPLVLEIVPHK EIDPKYHFLC+AP+KDPDGRPAVIRYSRKTK
Sbjct: 780 SGLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPDGRPAVIRYSRKTK 839

Query: 841 EQYVQTEVDGKPTGWKAFYDGGKWKVEDKR 870
           EQYVQ+EVDGKPTGWKAFYDG  WKVEDKR
Sbjct: 840 EQYVQSEVDGKPTGWKAFYDGNAWKVEDKR 869