Pairwise Alignments

Query, 464 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 457 a.a., multidrug efflux protein NorM (NCBI) from Escherichia coli BW25113

 Score =  387 bits (995), Expect = e-112
 Identities = 203/434 (46%), Positives = 281/434 (64%), Gaps = 1/434 (0%)

Query: 17  EVRGLLTLALPIMIGQLATTAMSFVDAVMAGRVSPQDLAAVGLGNSIWIPVYLLMTGTLL 76
           E R LL LA+P+++ Q+A TAM FVD VMAG  S  D+AAV +G SIW+P  L   G LL
Sbjct: 7   EARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLL 66

Query: 77  ATTPKVAQRYGAGQFSEIGPLVRQSLWLAVVVGITASLLLLCAEPILHVM-NVEPDLIEP 135
           A TP +AQ  G+G+   I   VRQ  WLA  V +   L+L  A  I+  M N++P L + 
Sbjct: 67  ALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADK 126

Query: 136 SMGYLHGIAAGMPAIALYYVLRCFSDGLGRTRPSMVMGLCGLALNIPLNYIFIYGHLGVP 195
           ++GYL  +  G P    + V R   +GL +T+P MVMG  GL +NIP+NYIFIYGH G+P
Sbjct: 127 AVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMP 186

Query: 196 AMGGVGCGWATAIAMWVMMLGLAVWTRWGPAYQSSELYKRFDWPQWAVIKRVLSIGLPIG 255
            +GGVGCG ATA   WVM L +  + +   + +     K    P  AV+KR++ +GLPI 
Sbjct: 187 ELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIA 246

Query: 256 IAIFAESSIFAVIALLIGSLGATVVSGHQIALNVSSLVFMIPYSLSMAVTVRVGQALGRG 315
           +A+F E ++FAV+ALL+  LG   V+GHQIALN SSL+F++P SL+ AVT+RVG  LG+G
Sbjct: 247 LALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQG 306

Query: 316 EPREARFAAGVGMGTALAYACLSCSLMLLFREQIAAIYTPDPVVIHLASMLIVFSALFQF 375
              +A+ AA  G+   +  A L+    +  REQIA +Y  +P V+ LA+ L++ +A++Q 
Sbjct: 307 STLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQI 366

Query: 376 SDSIQVTAAGALRGYQDTRVTMVLTLFAYWGVGLPVGYALGLTNWLGEPSGPSGLWQGLI 435
           SDSIQV  +G LRGY+DTR    +T  AYW +GLP GY L LT+ + EP GP+G W G I
Sbjct: 367 SDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFI 426

Query: 436 VGLSCAAGMLLVRL 449
           +GL+ AA M+++R+
Sbjct: 427 IGLTSAAIMMMLRM 440