Pairwise Alignments

Query, 826 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 807 a.a., predicted outer membrane protein (NCBI) from Escherichia coli BW25113

 Score =  525 bits (1351), Expect = e-153
 Identities = 310/816 (37%), Positives = 435/816 (53%), Gaps = 38/816 (4%)

Query: 24  QLLMPTFAMADPA--------YDALIIQARNGNFTPALTQLRQLPAERQTPGQISDHLVI 75
           +LL   F  A PA        YDALII+AR GN  PAL+      A   +  QI+D L I
Sbjct: 17  KLLTAAFLAASPAAKSAVNNAYDALIIEARKGNTQPALSWFALKSA--LSNNQIADWLQI 74

Query: 76  AGWAGQDAEVLKVYEAQGQNRNLTAQALATVARTYRNQKQWARAEAVYRKALLREPNNVD 135
           A WAGQD +V+ VY    +++ L A+  A VA  YRN +QW  +  +++KAL  EP N D
Sbjct: 75  ALWAGQDKQVITVYNRY-RHQQLPARGYAAVAVAYRNLQQWQNSLTLWQKALSLEPQNKD 133

Query: 136 LQLGLALTQADGGKTNEAVQRARALVAGKPDDPNRRMALGYALTRAGLQYDALHEFDQAF 195
            Q G  LT AD G  + A+ + + L +G PD  N  +A  Y    AG   D L    ++ 
Sbjct: 134 YQRGQILTLADAGHYDTALVKLKQLNSGAPDKANL-LAEAYIYKLAGRHQDELRAMTESL 192

Query: 196 IRAGDKPEVAREYIVALQKARLPEPALRLSAQRPGLVDPVTQRRLEGDLAAERVRMAEFA 255
                  +   EY+ AL+  +L             + D      +  D+ AE VR++   
Sbjct: 193 PENASTQQYPTEYVQALRNNQLAA----------AIDDANLTPDIRADIHAELVRLSFMP 242

Query: 256 TRTEKERYVIADRALQGYDQLLARWTPDPTAKDDVVRWRIDRLGALKARARTAEVIREYE 315
           TR+E ERY IADRAL  Y  L   W  +P       R ++D LGAL  R R  +VI  Y+
Sbjct: 243 TRSESERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDRYKDVISHYQ 302

Query: 316 TLQAEGVQLPTYAVRWVAASYLDQRLPEKAAPL-----YRQALSAPDADVGDRVEDSTAL 370
            L+  G  +P +   WVA++YL    P+KA  +     Y +   APD       E+   L
Sbjct: 303 RLKKTGQIIPPWGQYWVASAYLKDHQPKKAQSIMTELFYHKETIAPDLSD----EELADL 358

Query: 371 FYALLENDQVDEARAVAKNLADSQKPRVELKGLPIGNPNDEWMDAQQLAAQAGTYGSDLP 430
           FY+ LE++    A  V ++  ++  P + L G P   PND W+      +    Y +DLP
Sbjct: 359 FYSHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWLQGHSFLSTVAKYSNDLP 418

Query: 431 SSEKALEELVGKAPGSIGLRLAQAEMYRARDWPRRAERSLKETETQSPRDIGLEMSQGFT 490
            +E    EL   APG+ GLR+  A + +AR WPR AE  LK+ E   PR+I LE+ Q +T
Sbjct: 419 QAEMTARELAYNAPGNQGLRIDYASVLQARGWPRAAENELKKAEVIEPRNINLEVEQAWT 478

Query: 491 ALDLQEWRQLDILTDDVVARNPDNRQVQRLKRLRDVHDMAELRVEAYTGKSFGGGNNGDA 550
           AL LQEW+Q  +LT DVV R P +  V RLKR  DVH++AELR+   TG    G +    
Sbjct: 479 ALTLQEWQQAAVLTHDVVEREPQDPGVVRLKRAVDVHNLAELRIAGSTGIDAEGPD---- 534

Query: 551 GAVSGSRDWGIESRLYTPPIDEDWRLFAGAGYATADFEEGTGHHRWQVVGVERRTRDMTI 610
              SG  D  + + +Y+PP+ ++WR FAG GYA   F EG G  R  + GVE R+R++ +
Sbjct: 535 ---SGKHDVDLTTIVYSPPLKDNWRGFAGFGYADGQFSEGKGIVRDWLAGVEWRSRNIWL 591

Query: 611 EAEVSNHSYGDGSKQGAAVSIARDINDNWQYGGSLGYLLSTTPLRALNDGITANGGSGFI 670
           EAE +   +    K GA +S   D NDNW+ G  L  L    PLRA+ +G+T N    ++
Sbjct: 592 EAEYAERVFNHEHKPGARLSGWYDFNDNWRIGSQLERLSHRVPLRAMKNGVTGNSAQAYV 651

Query: 671 RWRANESREWKLTLSPSHFSDGNDRFEALLSGREGLYSSPKVQVDLGLEVGASRNSKEDT 730
           RW  NE R++ ++ + + FSD N R E  L G+E ++SSP + VD    +   +N++ DT
Sbjct: 652 RWYQNERRKYGVSWAFTDFSDSNQRHEVSLEGQERIWSSPYLIVDFLPSLYYEQNTEHDT 711

Query: 731 VYFNPKSDFTVLPVLNINHVLYHRYETQWSQQFQVGAGTYSQQDYSTGGIGLVGYGQRYR 790
            Y+NP   F ++P    +H+L+  YE  W Q F  G G   Q+ Y T  +  +GYGQR  
Sbjct: 712 PYYNPIKTFDIVPAFEASHLLWRSYENSWEQIFSAGVGASWQKHYGTDVVTQLGYGQRIS 771

Query: 791 WNDVLEAGANLSLISRPYDGDRERDLRLLVDLTYRF 826
           WNDV++AGA L    RPYDGDRE +L +  D+T+RF
Sbjct: 772 WNDVIDAGATLRWEKRPYDGDREHNLYVEFDMTFRF 807