Pairwise Alignments

Query, 377 a.a., ribonuclease D from Pseudomonas simiae WCS417

Subject, 371 a.a., ribonuclease D from Rhodanobacter sp000427505 FW510-R12

 Score =  173 bits (439), Expect = 6e-48
 Identities = 130/372 (34%), Positives = 189/372 (50%), Gaps = 29/372 (7%)

Query: 7   WICDNDSLGQHCAEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGVSAYLIDPLTIDNWQ 66
           WI   D+L    A       V LDTEFMR +TFYP   L+Q+G      L+DPL  D   
Sbjct: 11  WIAHPDALQAWLAAVPAGAAVGLDTEFMRRNTFYPQLALLQLGWNGRYALVDPLAFDIGA 70

Query: 67  PLAALLENPAVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGYSRLVQA 126
            L   L + A + ++H+  EDLE L  L    P  LFDTQ+AAA+  +G  + Y  LV  
Sbjct: 71  ALQPRLGSGAAVTIMHSAGEDLETLAPLLPEGPGQLFDTQIAAAFAGMGLGISYRALVAE 130

Query: 127 VLDIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVYTRLRPQLS-DDKYAWVLEDGA 185
           +  +EL KGETRSDWLQRPL+++Q +YAA D V+L  ++ +L  +L   D+ AW  ED A
Sbjct: 131 LAGVELDKGETRSDWLQRPLTDSQRNYAALDVVYLKTLHEQLAERLQRRDRSAWHAEDCA 190

Query: 186 EL-VANLRREVDPYEVYRDAKLAWKLSRAQLAVLRELCAWREQQARARDLPRNRIIREHS 244
            L +    RE DP +  R  + A     AQ A+LR L  WR++ AR  D+PR  ++ +  
Sbjct: 191 RLKLRASHREGDP-QPQRALRGAADWPPAQQALLRRLLLWRDRSARRLDVPRPWLLDDAL 249

Query: 245 LWPLAKSQPDNLAALGKIEDMHPRTVRQDGQFLL------DLIKRAGSVPMDQWPPAVAE 298
              LA+  P    +LG +E       R  GQ  L      +L +   +   D+   A A 
Sbjct: 250 ALNLAQQPP---RSLGDLEQ------RSRGQRALRSAQRGELFELLAATVSDEEIAATAR 300

Query: 299 PLP----VDAAALIKQLRAIGQAEAERLEMAPELMLRKKTLEALVKSGYPDGPYQLPDSL 354
            +P     +A   +  ++ +    A  L++ P L+  +K LE  V +       + P+ L
Sbjct: 301 -IPGHPQGEAKKALAAMKTLVDHLAGELDLPPGLLCPRKVLEEYVVT------TEWPEFL 353

Query: 355 RGWRRELMGQAL 366
            GWRRE++ + L
Sbjct: 354 EGWRREVLHERL 365