Pairwise Alignments

Query, 288 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  115 bits (289), Expect = 9e-31
 Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 12/293 (4%)

Query: 3   LRHIRYLLAVAEHRNFTRAAEALHVSQPTLSQQIKQLEDTLGAPLLDRSGRSVRLTDAGE 62
           L+ IR  + +AE  +F  AAEALH+SQP LS++IK+LE+ LG  LL+R+ R V LT  G 
Sbjct: 5   LQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVGR 64

Query: 63  TYVRFARLALQDLQAGTRAMHDVQDLSRGNLRLAMTPTFTAYLVGPLLAQFNQRHPGITV 122
            ++  AR  L D +    ++ ++ +   G + LA  PT   Y +  ++  +N+++P I +
Sbjct: 65  DFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYPKIRI 124

Query: 123 SIEELT-QDRMETALAEDALDIGIGFTGEHLPDIECEGLFVETLSGVVGANHPGLDSRQW 181
            + +L+  D +E  L  +A D GI       PDIE   L  E        +HP L +R  
Sbjct: 125 RLLDLSANDGLEAVLRGEA-DFGINMMSGQHPDIEFVSLVQEHFVLACRRDHP-LANRAS 182

Query: 182 LT------QPLVLLNQGFATRRYIDDYCRTQGINPVIAMEANSISAIIEIVRSTALATLL 235
           +T        L+ + +    R  +D       + P    E   +S  + +V +    + +
Sbjct: 183 VTWTELADYRLIGVGRLSGNRMLLDHALSGLNLRPKWFYEVQHLSTSLGMVEAGLGVSAM 242

Query: 236 PS-AIAQA-QPGLNAVAISPALPQRTVALLSRKGAYRSAACRAFVA-LIKAWP 285
           PS A+  A  P L +V +      RT+ L+ R+GA  S A   FV+ L++ WP
Sbjct: 243 PSLAMPNADHPTLVSVPLIEPQVTRTLGLVYRRGASLSPAAEKFVSILLQKWP 295