Pairwise Alignments

Query, 480 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 472 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  171 bits (432), Expect = 6e-47
 Identities = 122/419 (29%), Positives = 189/419 (45%), Gaps = 10/419 (2%)

Query: 56  DWWKLYKDPRLDELVRQAMASNTDLRVAAANLQRARYQTQQAESAGGWSLGAKAEAQRLQ 115
           +WW LY D RL++L +Q + +N DL  A A+   ++    Q  +     + A A+  R +
Sbjct: 57  EWWTLYNDSRLNDLQQQLLKANPDLAAALAHFDASQAYASQLHAGLFPQISASAQPLRQR 116

Query: 116 ESGEAFLLADKVP-VGNIGSVGITTSYQFDLFGTLQRGIESAQASADAAQAAADIARITL 174
           +S    L  D  P V N  + G + SY  DL+G ++  + +  A A A+     +AR++L
Sbjct: 117 QSDSRPLRGDTQPSVYNSNTAGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSL 176

Query: 175 VADVVRSYTQVCAANEELAIANESLDLQAQSTQLTQRLRDAGRGDETQVTRSQTQYKSLR 234
              +   Y Q+   + +  I + SLD   Q+ QLT+   +     E  +TR+Q Q    +
Sbjct: 177 QHQLATLYVQLNGLDAQARILDRSLDDFRQALQLTRSRYEGKIASELDLTRAQNQLAEAK 236

Query: 235 ADMPRYEALRQAGLFRLSMLLAKPVDQLPAGTGT-CAELPHIAQLLPVGDGATLLKRRPD 293
           A        R      +  L+                 LP I   LP    + LL+RRPD
Sbjct: 237 AQWDEIRGQRNLTEHAIGELVGVAASDFSLSPSPQLISLPGIPSQLP----SHLLQRRPD 292

Query: 294 VRQAERQLAAATARIGVATGALYPDISIGATVG--TVGLLDNLGQPATNRWGFGPMISWT 351
           +  AER++ AA A IGVA  A YPD S+   +G  T G+  NL       W  GP+++  
Sbjct: 293 IAAAERRVFAANANIGVAKAAWYPDFSLTGLIGGQTQGV-GNLLSAGNRYWALGPLVNLP 351

Query: 352 VPTNGA-RARVHEAEAATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESA 410
           +   G   A   +A+A  + A AH+   VL A+RE +  LAQ     Q       A ++A
Sbjct: 352 IFDGGRLSANERQAKAEFEEASAHYRSQVLKAVREVEDNLAQLRDLQQEAQDEQAAADAA 411

Query: 411 KEAAGQTHRFFQAGRASFLADLQATRTYTDVRAQLAAANTQVAMSQIDLFLALGGGWES 469
           +         +QAG  S+L  + A       +  L A  T+   + + L  ALGGGW +
Sbjct: 412 QHTQSLAMNSYQAGAVSYLDVVTAQTAALQAQRTLQAVQTRQLQASVGLVTALGGGWHA 470