Pairwise Alignments

Query, 480 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 487 a.a., Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like from Variovorax sp. SCN45

 Score =  340 bits (872), Expect = 6e-98
 Identities = 197/473 (41%), Positives = 261/473 (55%), Gaps = 4/473 (0%)

Query: 1   MKQLLATAALGLLLSAC--QVVGPDYSLPDKAAINRGDLQGHIAGEGNNVVSAPVPADWW 58
           + +LLA AA   LL+ C    VGPD+  P   +  +    G       N   A +P  WW
Sbjct: 4   LHRLLAAAAAATLLAGCAHSPVGPDHVAPATLSPAQAASAGPFLSAAGNATDADLPPSWW 63

Query: 59  KLYKDPRLDELVRQAMASNTDLRVAAANLQRARYQTQQAESAGGWSLGAKAEAQRLQESG 118
            LY+DP LD LV QA A NTDLR A A+ +R +    +   +   ++           SG
Sbjct: 64  HLYQDPLLDALVDQAFAHNTDLRQAIASFEREQALEAEVRGSQRPTVALNGGPGFGHVSG 123

Query: 119 EAFLLADKVPVGNIG-SVGITTSYQFDLFGTLQRGIESAQASADAAQAAADIARITLVAD 177
              +  D  P G      G   SYQ DLFG L R IE+A+A + AAQAA D+ R+ +   
Sbjct: 124 LTLVQRDYEPPGRFTYGAGANLSYQLDLFGQLHRAIEAAEAGSGAAQAAVDLVRVNVAGG 183

Query: 178 VVRSYTQVCAANEELAIANESLDLQAQSTQLTQRLRDAGRGDETQVTRSQTQYKSLRADM 237
             R+Y +VC     L  A+ S+ LQ ++ QL QRL+ AG+       R++ Q + LRA +
Sbjct: 184 TARAYAEVCTTGLRLRSAHASVRLQEEAVQLAQRLQQAGKVGTIDTARARGQLELLRASL 243

Query: 238 PRYEALRQAGLFRLSMLLAKPVDQLPAGTGTCAELPHIAQLLPVGDGATLLKRRPDVRQA 297
           P  +A RQ  L+RL+ L        PA    C   P  A  LPVGDGA+LL+RRPDVRQA
Sbjct: 244 PPLQAQRQNALYRLATLTGAAPRDFPAQVAGCERPPRTAAPLPVGDGASLLRRRPDVRQA 303

Query: 298 ERQLAAATARIGVATGALYPDISIGATVGTVGLLDNLGQPATNRWGFGPMISWTVPTNG- 356
           ER LAAATARIGVAT  LYP + +G + G+ G L+  G   +  +  GP+ISWT+PTNG 
Sbjct: 304 ERSLAAATARIGVATAELYPKVVLGLSAGSAGFLNRFGNRESLSYSLGPLISWTLPTNGV 363

Query: 357 ARARVHEAEAATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESAKEAAGQ 416
           ARAR+ +AEAAT+ A A FD  VL A+RE +  L  Y  +L R  ALA A + +   A Q
Sbjct: 364 ARARIAQAEAATRQAAARFDATVLTALREAEIALESYARELDRHAALAAARDQSAAVARQ 423

Query: 417 THRFFQAGRASFLADLQATRTYTDVRAQLAAANTQVAMSQIDLFLALGGGWES 469
               +  G+ + L  L A RT     A LAA+  Q+A  Q+ +F+ALGGGWES
Sbjct: 424 ARTLYVNGKTAQLDALDAMRTLAASEAALAASQAQLADDQLAVFMALGGGWES 476