Pairwise Alignments

Query, 480 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  228 bits (582), Expect = 3e-64
 Identities = 154/468 (32%), Positives = 245/468 (52%), Gaps = 15/468 (3%)

Query: 5   LATAALGLLLSACQVVGPDYSLPDKAAINRGDLQGHIAGEGNNVVSAPVPADWWKLYKDP 64
           L  + L L L+AC  VGPDY  P   A     L   +  +  +   +   + WWK + DP
Sbjct: 7   LTPSLLALALAAC-AVGPDYQAP---ATEPAQLSSDVQAKAYD--RSRFESLWWKQFDDP 60

Query: 65  RLDELVRQAMASNTDLRVAAANLQRARYQTQQAESAGGWSLGAKAEAQ--RLQESGEAFL 122
            L++LV+ ++  N DLRVA A L+ AR   + AE+     + ++A +   + Q  G+   
Sbjct: 61  VLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKGQIPGQT-- 118

Query: 123 LADKVPVGNIGSVGITTSYQFDLFGTLQRGIESAQASADAAQAAADIARITLVADVVRSY 182
             ++V       +G+  +++ DLFG +QR IE+++A    A A     +++L+A++V +Y
Sbjct: 119 -TERVNSERY-DLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAY 176

Query: 183 TQVCAANEELAIANESLDLQAQSTQLTQRLRDAGRGDETQVTRSQTQYKSLRADMPRYEA 242
            Q+  A     IA  +L  Q +S  +T+ LRDAG G++  V R+  +   + A +P+ +A
Sbjct: 177 GQLRGAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQLQA 236

Query: 243 LRQAGLFRLSMLLAKPVDQLPAGTGTCAELPHIAQLLPVGDGATLLKRRPDVRQAERQLA 302
            +     R++ LL +  D L       A LP IA+ LPVGD   LL+RRPD+R AERQLA
Sbjct: 237 EQARARHRIATLLGQRPDALSVDLSPKA-LPAIAKALPVGDPGELLRRRPDIRSAERQLA 295

Query: 303 AATARIGVATGALYPDISIGATVG-TVGLLDNLGQPATNRWGFGPMISWTVPTNGA-RAR 360
           AATA +GVAT  L+P +S+   +G T      +G  A N W  GP I+W     G+ RAR
Sbjct: 296 AATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVRAR 355

Query: 361 VHEAEAATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESAKEAAGQTHRF 420
           +  A+A  +GALA+++  VL A+ E+    + Y    QR  +L    +++++AA      
Sbjct: 356 LRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELASIR 415

Query: 421 FQAGRASFLADLQATRTYTDVRAQLAAANTQVAMSQIDLFLALGGGWE 468
           ++ G   +L  L A R         A     +    + ++ ALGGGW+
Sbjct: 416 YREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQ 463