Pairwise Alignments

Query, 480 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  159 bits (403), Expect = 2e-43
 Identities = 135/493 (27%), Positives = 228/493 (46%), Gaps = 38/493 (7%)

Query: 2   KQLLATAALGLLLSACQVVGPDYSLPDKAAINRGDLQGHIAGEGNNVVSAPVPADWWKLY 61
           K LL+ A    +L  C ++ PDY  P+ A +     QG       +   A     W + +
Sbjct: 3   KSLLSLAVTAFILGGCSLI-PDYQTPE-APVAAQWPQGPAYSPTQSADVAAAEQGWRQFF 60

Query: 62  KDPRLDELVRQAMASNTDLRVAAANLQ--RARYQTQQAESAGGWSLGAKAEAQR----LQ 115
            DP L +L++ ++ +N DLRVAA NL   RA+Y+ Q+A+     S       QR    + 
Sbjct: 61  HDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMS 120

Query: 116 ESGEAFLLADKVPVGNIGSVGITTSYQFDLFGTLQRGIESAQASADAAQAAADIARITLV 175
           ++GE+ + +         ++G++ +Y+ DLFG ++   E A  +  +++ A    +I LV
Sbjct: 121 QTGESGITSQYS-----ATLGVS-AYELDLFGRVRSLTEQALETYLSSEQARRSTQIALV 174

Query: 176 ADVVRSYTQVCAANEELAIANESLDLQAQSTQLTQRLRDAGRGDETQVTRSQTQYKSLRA 235
           A V  +Y    A      +  E+L    +S  LT+R  + G      V++++T  +  R 
Sbjct: 175 ASVANAYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARV 234

Query: 236 DMPRYEALRQAGLFRLSMLLAKPVDQLPAGTGTCAELPHIAQL-------LPVGDGATLL 288
              +Y+ L    +  L++LL         GTG  A+L    +L       +P G  + +L
Sbjct: 235 KYSQYQRLVAQDVNSLTVLL---------GTGIPADLAKPLELDADQLAEVPAGLPSDIL 285

Query: 289 KRRPDVRQAERQLAAATARIGVATGALYPDISIGATVGTVGL-LDNLGQPATNRWGFGPM 347
           +RRPD+++AE  L AA A IG A  A +P IS+ A  G++   + +L       W F P 
Sbjct: 286 QRRPDIQEAEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQ 345

Query: 348 ISWTVPTNGA-RARVHEAEAATQGALAHFDGVVLNAIRETQTGLA---QYTAQLQRRDAL 403
           I+  +   G+ +A +  ++      +A ++  +  A +E   GLA    +  QLQ +  L
Sbjct: 346 INLPIFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDL 405

Query: 404 AEAGESAKEAAGQTHRFFQAGRASFLADLQATRTYTDVRAQLAAANTQVAMSQIDLFLAL 463
            +A +     A    R ++ G  S L  L A R     +  L         S+++L+ AL
Sbjct: 406 VQANQDYYRLA---ERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKAL 462

Query: 464 GGGWESGRTQASQ 476
           GGGW     QA+Q
Sbjct: 463 GGGWYEQTGQANQ 475