Pairwise Alignments

Query, 480 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  184 bits (468), Expect = 4e-51
 Identities = 141/475 (29%), Positives = 223/475 (46%), Gaps = 17/475 (3%)

Query: 5   LATAALGLLLSACQVVGPDYSLPDKAAINR-GDLQGHIAGEGNNVVSAPVPADWWKLYKD 63
           L+   L +LL+ C  +GPD+  PD  A  +   LQG  A   +   + P+   WW+ + D
Sbjct: 7   LSPLLLAVLLTGC-TLGPDFQRPDSQAPQQWAPLQGEAAA--SQPQAEPLELRWWETFHD 63

Query: 64  PRLDELVRQAMASNTDLRVAAANLQRARYQTQQAESAGGWSLGAKAEAQRLQESGEAFLL 123
            RL  L+++    N DL++A+A L ++R       +    S+   A   R + S +   L
Sbjct: 64  ARLSALIQRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSADG--L 121

Query: 124 ADKVPVGNIGSVG-------ITTSYQFDLFGTLQRGIESAQASADAAQAAADIARITLVA 176
           +D  P G  G          +   ++ DL+G ++R +E+A A+ + A+       + L++
Sbjct: 122 SD--PSGKAGKEAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLS 179

Query: 177 DVVRSYTQVCAANEELAIANESLDLQAQSTQLTQRLRDAGRGDETQVTRSQTQYKSLRAD 236
           +   +Y Q+ A    L +  ++L +   S +L+Q  +  G      V ++  Q  S+ + 
Sbjct: 180 ETAGNYIQLRAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESR 239

Query: 237 MPRYEALRQAGLFRLSMLLAKPVDQLPAGTGTCAELPHIAQLLPVGDGATLLKRRPDVRQ 296
           +P  EA R   +  LS+L A+P   L A      ELP   Q   +G  + L +RRPD+RQ
Sbjct: 240 LPSLEAQRDDLINALSLLAAEPPRSLQAELLQGGELPAPQQKFAIGLPSELAERRPDIRQ 299

Query: 297 AERQLAAATARIGVATGALYPDISIGATVGTVGL-LDNLGQPATNRWGFGPMISWTVPTN 355
           AE +L AATA IGVA    YP I +  +VG   L L + G   + R+ FGP +S  +   
Sbjct: 300 AEARLHAATASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEG 359

Query: 356 G-ARARVHEAEAATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESAKEAA 414
           G  +  +   EA  Q A  ++  VVL A  E    L  Y A   RRD LAEA    + A 
Sbjct: 360 GRLKGTLELREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIAL 419

Query: 415 GQTHRFFQAGRASFLADLQATRTYTDVRAQLAAANTQVAMSQIDLFLALGGGWES 469
               R +  G   FL  L           Q   ++  V+ + + L+ ALGGGW++
Sbjct: 420 ETAQRQYVEGAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQA 474