Pairwise Alignments

Query, 480 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  173 bits (439), Expect = 1e-47
 Identities = 145/469 (30%), Positives = 219/469 (46%), Gaps = 14/469 (2%)

Query: 10  LGLL--LSACQVVGPDYSLPDKAAINRGDLQGHIAGEGNNVVSAPVPADWWKLYKDPRLD 67
           LGLL  L+ C  VGPD+  P    ++       +  +     +AP    WW ++ D  LD
Sbjct: 8   LGLLMVLAGCTQVGPDFEKPQAPWLDGWSTP--MIEQAGRSAAAPDLRQWWAVFADSTLD 65

Query: 68  ELVRQAMASNTDLRVAAANLQRARYQTQQAESAGGWSLGAKAEAQRLQ-ESGEAFLLADK 126
            L+ +A A+NT+LRVA   +  AR Q    ++ G +    +  AQ L  +  ++   + +
Sbjct: 66  ALIAEADANNTNLRVAGLRIAEARAQLAIVQT-GRYPQLQQLSAQSLYLKQDQSGTPSAR 124

Query: 127 VPVGNIGSVGITTSYQFDLFGTLQRGIESAQASADAAQAAADIARITLVADVVRSYTQVC 186
             V    SVG    ++ D +G   R IESA A   A+QA    A + L A V  +Y  + 
Sbjct: 125 DSVFWQSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFALR 184

Query: 187 AANEELAIANESLDLQAQSTQLTQRLRDAGRGDETQVTRSQTQYKSLRADMPRYEALRQA 246
            A   LAIA E+   QA+S ++T+RL   G  DE    +++TQY +  A +P +E    A
Sbjct: 185 TAEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQLNA 244

Query: 247 GLFRLSMLLAK---PVDQLPAGTGTCAELPHIAQLLPVGDGATLLKRRPDVRQAERQLAA 303
               L  LL +   P+ QL AG G    LP+ A L  V   A+LL+RRPD+R AE+ +AA
Sbjct: 245 LRNILCSLLGRPPGPLPQLEAGHGQ-LPLPNRAVLQDV--PASLLQRRPDIRAAEQAVAA 301

Query: 304 ATARIGVATGALYPDISIGATVGTVGLLDNLGQPATNRWGFGPMISWTVPTNGARAR-VH 362
            +A +GVA   LYP +S+  ++G   L  N   P T     GP + W     G R   V 
Sbjct: 302 QSALVGVAEADLYPQLSLLGSIGWTFLSAN-HLPDTFDLAAGPSLIWNPFDYGRRKNTVR 360

Query: 363 EAEAATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESAKEAAGQTHRFFQ 422
             +A  Q  +  +   V  A RE     +     LQ      +A ++A+ +       ++
Sbjct: 361 VEDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLNLASSQYR 420

Query: 423 AGRASFLADLQATRTYTDVRAQLAAANTQVAMSQIDLFLALGGGWESGR 471
            G A F   L A +     +     +      S + L+ ALGGGW++ R
Sbjct: 421 EGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWDASR 469