Pairwise Alignments

Query, 480 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

 Score =  671 bits (1732), Expect = 0.0
 Identities = 340/468 (72%), Positives = 399/468 (85%), Gaps = 1/468 (0%)

Query: 1   MKQLLATAALGLLLSACQVVGPDYSLPDKAAINRGDLQGHIAGEGNNVVSAPVPADWWKL 60
           MKQL+  A L L L AC +VGPDY +P  AA+ R DL G +  + ++VVSAPVP DWW+L
Sbjct: 1   MKQLIL-AGLCLSLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQL 59

Query: 61  YKDPRLDELVRQAMASNTDLRVAAANLQRARYQTQQAESAGGWSLGAKAEAQRLQESGEA 120
           Y+D RL+ELVRQA+++NT+LRVAAAN+ +AR Q + AES GG++ G K  AQRLQESGEA
Sbjct: 60  YQDQRLNELVRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKLGAQRLQESGEA 119

Query: 121 FLLADKVPVGNIGSVGITTSYQFDLFGTLQRGIESAQASADAAQAAADIARITLVADVVR 180
           FL  +KVPV NIG   I+ SYQFDL+GT +RG E+A+A+ADA QAAAD ARITLVADVV+
Sbjct: 120 FLQPEKVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVK 179

Query: 181 SYTQVCAANEELAIANESLDLQAQSTQLTQRLRDAGRGDETQVTRSQTQYKSLRADMPRY 240
           +YTQVC+ANEE  IA ESLDLQ QS +L QRLRDAGRGDETQVTRSQTQ+KSLRA++PR+
Sbjct: 180 AYTQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRF 239

Query: 241 EALRQAGLFRLSMLLAKPVDQLPAGTGTCAELPHIAQLLPVGDGATLLKRRPDVRQAERQ 300
           +A R+ G++ L+ LLAKPVDQLPAGT  CAELPH+ QL+PVGDGA LLKRRPDVRQAERQ
Sbjct: 240 KAERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQAERQ 299

Query: 301 LAAATARIGVATGALYPDISIGATVGTVGLLDNLGQPATNRWGFGPMISWTVPTNGARAR 360
           LAAATA IGVATGALYPDISIGA VGT+G+L+NLG+P+TNRWGFGP ISW++PTNG RAR
Sbjct: 300 LAAATAYIGVATGALYPDISIGAQVGTIGILENLGEPSTNRWGFGPQISWSIPTNGTRAR 359

Query: 361 VHEAEAATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESAKEAAGQTHRF 420
           +  AEA+TQ ALAHFDGVVLNAIRETQT LAQY+A L RRDALAEA +SAKEAA QTHR+
Sbjct: 360 IRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTHRY 419

Query: 421 FQAGRASFLADLQATRTYTDVRAQLAAANTQVAMSQIDLFLALGGGWE 468
           +QAGR SFLADLQATRTYTD+RAQLAAAN+QVA  QI +FLALGGGW+
Sbjct: 420 YQAGRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWK 467