Pairwise Alignments

Query, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  109 bits (272), Expect = 9e-29
 Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 5/287 (1%)

Query: 15  LMVFIAVYDQSSVTEVSETLFVSQSTVSYSLKKLRTSFEDELFINTRAGMRPTYKATTMY 74
           L +F  +Y   SVT  +E L  SQ T+S  L +LR    D LF+ T  GM PT +A  + 
Sbjct: 13  LQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQLI 72

Query: 75  GHVQKILESINLCHAGGQAFDPTQKAVTFNVCAPEYFEQLILPRLLKNFDHADLPVIVNV 134
           G  +++LES+    A    F        F +C  +     +LP +L +       + +  
Sbjct: 73  GPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPGIRLEA 132

Query: 135 QKLETDIPADALREGRLDLVICFGPNFHRAHKDFRTQMLLEDDLVCVFDKRSAPREPAFS 194
            +++ +  + AL  G  DL I F P           Q+L E D VC+ + +        S
Sbjct: 133 ARIDGNTES-ALESGEADLAIGFVPWLGGG---MYQQVLFEQDWVCLSNPQHPRLGDGMS 188

Query: 195 LHSFVERRHVFPTPWTSDTNMIDGWLARQAHKRQVIARANSYSAALKMITGTDFIVTLPR 254
           L  +    HV    + +   +++  LAR   +R+++    ++    K+I  TD + TLPR
Sbjct: 189 LERYRAEGHV-QISFGTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTLPR 247

Query: 255 RVQKLLAPATVFGHCEAPNGLPGFTLEMQWNETSEQDSANTWFREQV 301
            + + LA        + P  + GFT++  W+    QD+ N W RE V
Sbjct: 248 HIGQTLADMHGLQVHDCPFEVEGFTVKQHWHARYHQDNGNRWLREVV 294