Pairwise Alignments

Query, 296 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 399 a.a., hemolysin D from Pseudomonas simiae WCS417

 Score =  102 bits (255), Expect = 1e-26
 Identities = 82/300 (27%), Positives = 131/300 (43%), Gaps = 56/300 (18%)

Query: 16  LIVTFAVVVVWRMV-MYYMFAPWTRDGHIRADIVQIAPDVSGLIQRVDVRDNQLVTKGQV 74
           LIV  AVV VW    +Y  F   T D ++  ++V+I P V+G +  +   D  LV +GQV
Sbjct: 30  LIVVLAVVGVWGWYELYGRFNESTDDAYVNGNVVEITPLVTGTVVSIGADDGDLVHEGQV 89

Query: 75  LFAVDQDRFKLALRQAQAAVA---------------------DRQETLAQAQREYKRNRG 113
           L   D +   + L+ AQA +A                      ++  +  AQ  + R + 
Sbjct: 90  LVNFDPNDAAVGLQSAQANLARTVRQVRGLYSNVDGMKAQVNAQKADVQTAQDNFNRRKA 149

Query: 114 L--GNLVPSEQLEESQSRVARAQSALAE-------------------------AQVTVDS 146
           L  G  +  E+L  ++  +  A++AL                           A   +  
Sbjct: 150 LAQGGAISQEELSHARDSLTAAKNALTNLEQQLKTTNALVDDTVISSHPDVQAAAAQLRQ 209

Query: 147 AQLNLDRSVIRSPVDGYVNDRAPRTQEFVTAGRPVLSVVDSNSFHIDGYFEETKLDGIHV 206
           A L   RS + +PV GYV  R  +  + V  G  +++V+  N   ID  F+ET+L  + +
Sbjct: 210 AYLTNARSTLIAPVTGYVAKRTVQLGQRVQPGTALMAVIPLNQLWIDANFKETQLRDMRI 269

Query: 207 GMGVDIR--VIGDNARLHGHVQSIVAGIEDRDRSSGSNLLPNVNPAFSWVRLAQRIPVRI 264
           G  VDI   + G + +  G + S+ AG       S   LLP  N   +W+++ QR+PVRI
Sbjct: 270 GQPVDIESDIYGSDVKFSGTIDSLGAG-----TGSAFALLPAQNATGNWIKIVQRVPVRI 324