Pairwise Alignments

Query, 310 a.a., 2-deoxy-3-keto-D-ribonoate cleavage enzyme (from data) from Pseudomonas simiae WCS417

Subject, 310 a.a., hypothetical protein AF1210 from Variovorax sp. SCN45

 Score =  434 bits (1116), Expect = e-126
 Identities = 205/310 (66%), Positives = 246/310 (79%)

Query: 1   MSKNRPVIITCAVTGAIHTPSMSPHLPITAQEIADAAIGAAEAGAAIVHLHARDPNDGRP 60
           MS  + VIITCAVTGAIHTPSMSPHLPITAQEI DAA+GAAEAGAAI+HLHARDP  G+P
Sbjct: 1   MSAQKKVIITCAVTGAIHTPSMSPHLPITAQEITDAAVGAAEAGAAIIHLHARDPVTGKP 60

Query: 61  SQDPALFAEFLPQIKAASDVVINITTGGAPTMGVEERLQPVMQFKPELASLNMGSMNFGL 120
            Q P  F  FL  IKA SD VIN+TTGG+P M V+ER+ P    KPE+AS+NMG+MNFGL
Sbjct: 61  DQRPEAFVPFLKDIKARSDAVINLTTGGSPYMTVQERMMPAKVLKPEVASMNMGTMNFGL 120

Query: 121 YEMLNRFTDFKHDWERPYLEESDDRIFRNTFRDITHILNACAENRTRFEIECYDIGHLYT 180
           + ML RF +FKHDWERPYLE S D IFRNT+ D+  +L   + N+TR+E ECYD  HLY 
Sbjct: 121 FPMLERFKEFKHDWERPYLEGSKDLIFRNTYGDLETVLTELSANQTRYEFECYDTSHLYN 180

Query: 181 AAHFLERGLLKPPLFIQSVFGLRGGIGGHPEDLAHMRRTADRLFGSDYVWSILGAGRGQI 240
            AHF++RGL+K P F+Q+VFG+ GGIG HP+D+ HM+RTADRLFG+DY WS+LGAGR Q+
Sbjct: 181 LAHFVDRGLVKAPFFVQTVFGILGGIGSHPDDVMHMKRTADRLFGADYRWSVLGAGRSQM 240

Query: 241 PLATMGLSMGSNARVGLEDSLWDGPGKLAASNADQVRRIRTVIEALGHRVATPDEAREIL 300
           P+A M  +MG N RVGLEDSLW G G+LA +NA QVR++R +IE LG  VATP EAREIL
Sbjct: 241 PIAAMSAAMGGNVRVGLEDSLWIGAGRLAETNAQQVRKVREIIEGLGLGVATPAEAREIL 300

Query: 301 GLKGRDQVNF 310
            LKG++ V+F
Sbjct: 301 ALKGKNAVDF 310