Pairwise Alignments

Query, 240 a.a., Transcriptional regulator of deoxyribose catabolism (from data) from Pseudomonas simiae WCS417

Subject, 230 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score = 79.3 bits (194), Expect = 6e-20
 Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 5/218 (2%)

Query: 18  TLQDQVYRQIREALMSGRFQPGQKLTIRGLAEALGSSPMPVREALQRLSAENAFEVTETS 77
           T  D V   +RE ++SG    G  L    LA   G S MPVR+A+++L AE         
Sbjct: 18  TAMDYVVESLREGILSGAIAEGTALRQEELASKFGLSRMPVRDAIRQLEAEGLVTYEVHK 77

Query: 78  RLRVRLMTVERLREIRDARVALEGLLAEKAVLLLQKADLDEITDLCQQMQHAADEVDVSR 137
              V +MT+E + EI D R+  E    +     + + DL ++ +L   M+HA D   +S 
Sbjct: 78  GASVAIMTIEDIVEIYDMRIMAECTALDFGFDNIVENDLAQMYELLSTMEHATDPHHLSE 137

Query: 138 YLWTNFAFHRRIYAVAQAELTMAAVENFWLHMGPCFALVAPDKAHLQRSMEAHTRIVEAL 197
               N  FH  +Y+ A+    +A +++    +      +  +  + ++S + H  I+ A 
Sbjct: 138 ---LNEKFHHFLYSKAKRPRLLALIKSLHDSVDRHLRFLLTNLDYHKKSQQDHKSILSAC 194

Query: 198 AARDGGGARAAVTDDIMQAADSLARLLVKNDRSRSSVS 235
           A  D   A+  + + + +  D++   L K  R R  VS
Sbjct: 195 AKGDREAAKQFLAEHLAEGRDAIVTFLEK--RRRQDVS 230