Pairwise Alignments

Query, 240 a.a., Transcriptional regulator of deoxyribose catabolism (from data) from Pseudomonas simiae WCS417

Subject, 219 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score = 58.9 bits (141), Expect = 8e-14
 Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 8/199 (4%)

Query: 17  DTLQDQVYRQIREALMSGRFQPGQKLTIRGLAEALGSSPMPVREALQRLSAENAFEVTET 76
           D+L +Q+   + E ++ G   PG+++  + + +AL  S   VREAL  L   +   +   
Sbjct: 7   DSLSEQIADYLAERIIRGELAPGERIQEQKVTQALNVSRGSVREALLILERRHLVAILPR 66

Query: 77  SRLRVRLMTVERLREI----RDARVALEGLLAEKAVLLLQKADLDEITDLCQQMQHAADE 132
               V  +    +R +     +  + L   +A+K      +ADL    ++ Q++Q A D+
Sbjct: 67  RGAHVTQLDERSVRSLCSLMGEFYILLGNAVAQK---WRTEADLRPFLEIQQRLQRAHDQ 123

Query: 133 VDVSRYLWTNFAFHRRIYAVAQAELTMAAVENFWLHMGPCFALVAPDK-AHLQRSMEAHT 191
           +D+  ++  +FA  R  Y  A        VEN    M   + L    + A++   ++   
Sbjct: 124 LDIKTFVADSFAVMRAAYPFADNPFLQETVENLQPAMSRAYYLSLDQRQANMIDYLDLFA 183

Query: 192 RIVEALAARDGGGARAAVT 210
           R++EA+ +RD    R  +T
Sbjct: 184 RLLEAVVSRDLPRIREVLT 202