Pairwise Alignments

Query, 240 a.a., Transcriptional regulator of deoxyribose catabolism (from data) from Pseudomonas simiae WCS417

Subject, 238 a.a., GntR family transcriptional regulator from Pseudomonas putida KT2440

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)

Query: 2   TDGPLLLPTLRQVSRDTLQDQVYRQIREALMSGRFQPGQKLTIRGLAEALGSSPMPVREA 61
           T GP+L         +TL + V+R+I+ A++ G   PG K++   LA   G S  P+REA
Sbjct: 6   TPGPVLTD-----ETETLSENVFRRIQAAIVKGDIAPGSKISEPELARTYGISRGPLREA 60

Query: 62  LQRLSAENAFEVTETSRLRVRLMTVERLREIRDARVALEGLLAEKAVLLLQKADLDEITD 121
           + RL  +           RV  +    L E+ + R +LEG+    A   + +AD+DE+  
Sbjct: 61  IHRLEGQRLLVRVPHVGARVVSLNHAELIELYEIRESLEGMACRLAAERMSQADIDELRR 120

Query: 122 LCQQMQH-AADEVDVSRYLWT-NFAFHRRIYAVA--QAELTMAAVENFWL-HMGPCFALV 176
           +    +  AA +  +  Y    ++ FH RI   +  Q  + M   E + L  M       
Sbjct: 121 VLDTHERDAAFQAGLGYYQQEGDYDFHYRIIQGSGNQTLVKMLCGELYQLVRMYRIQFSA 180

Query: 177 APDKAHLQRSMEAHTRIVEALAARDG 202
            P++   +++   H RI++A+A RDG
Sbjct: 181 TPNRP--RQAFAEHHRILDAIADRDG 204