Pairwise Alignments

Query, 240 a.a., Transcriptional regulator of deoxyribose catabolism (from data) from Pseudomonas simiae WCS417

Subject, 283 a.a., HTH-type transcriptional repressor NanR from Azospirillum sp. SherDot2

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 17/223 (7%)

Query: 9   PTLRQVSRD-TLQDQVYRQIREALMSGRFQPGQKLTIRGLAEALGSSPMPVREALQRLSA 67
           P  R + R  T  D ++R +R  ++S + +PG+ +  + +AEA G S  PVREA+ RL+ 
Sbjct: 40  PARRDMRRGPTAADAIHRDLRAEIVSLKRKPGEPIAEKQIAEAYGVSRTPVREAVLRLAD 99

Query: 68  ENAFEVTETSRLRVRLMTVERLREIRDARVALEGLLAEKAVLLLQKADLDEITDL--CQQ 125
           E   E+   S   V  + +  L E    R  LE      A    ++A   +I  L  C +
Sbjct: 100 EGLIEIFPQSGTFVARIPLGALPEAGVIRKVLERATVRFAA---ERASRSQIAALRACLE 156

Query: 126 MQHAADEV-DVSRYLWTNFAFHRRIYAVAQAELTMAAVENFWLHMGPCFALVAPDKAHLQ 184
            Q   D V D   +   + AFH +I  +A        ++   + +  C  L  P    ++
Sbjct: 157 HQREVDAVGDADGFHQADEAFHAQITEMAGYPGFWGIIQQAKVQLDRCRRLTLPVPGRMR 216

Query: 185 RSMEAHTRIVEALAARDGGGARAAV----------TDDIMQAA 217
             +  H  IVEA+A  D   A  ++           DD+  AA
Sbjct: 217 TVIAEHEAIVEAIAGHDPDRAEQSLVRHLDNLQITVDDVRNAA 259