Pairwise Alignments

Query, 408 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 391 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

 Score =  177 bits (448), Expect = 6e-49
 Identities = 114/379 (30%), Positives = 195/379 (51%), Gaps = 7/379 (1%)

Query: 26  ILSVAVGAFALVTSEFLPVGVLNDVAADLSISAGHAGLMVTLPGIMAALAAPLLSVIIGA 85
           ++++A+GAF +  +EF P+G+L  +A DL +S   AGL+V+   I   + APL+++    
Sbjct: 7   LVALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLMTLATVK 66

Query: 86  MDRRYLLIGLTLIMIIANMVVAFASDFSLLLFGRVLLGISIGGFWATAIALSGRLAPKGV 145
           + RRYLLIGL  I  + N++ A ASD++ LL  RV+  ++ G F+     ++  + P   
Sbjct: 67  IPRRYLLIGLMAIFTLGNLMSALASDYASLLVARVVTSLNHGAFFGIGSIVAASVVPP-E 125

Query: 146 DVAKATSIIMMGVTLATVLGVPVGTWLSGLMGWRMTFLVTALLGLPVLLAQVLLLP-ILK 204
             A A + + MG+TLAT+ GVP+ TWL  ++GWR  F   A LGL  +      LP +  
Sbjct: 126 KRAGAVAAMFMGLTLATIGGVPLATWLGEMLGWRTAFWGIAGLGLVAMTTLWYALPNVAS 185

Query: 205 PEKPILVSDLPALFINPRARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLL 264
           P+    ++++  L   P     L+  ++   A F  +TY+AP  ++ +    P + ++L+
Sbjct: 186 PKGEGAMAEIRVLGRRP-VLAALLLTVVGSSAMFTVFTYIAPILQHEAAASTPFVTAMLV 244

Query: 265 MFGVAGVAGNIFAGFAANRSVRYTLLLVALMIGTSTALFPYFATGLTGAAMLIALWGFAF 324
           +FGV    GN++ G AA+RS+  TL+L    +     +FP         A+ I +WG A 
Sbjct: 245 LFGVGLTLGNVWGGKAADRSIDRTLILSLAGLIAVLLVFPLVLDWPLPTALAILVWGAAS 304

Query: 325 GAFPACASIWMFVVAPKDVERGMPLFVALFQVIIALGSFFGGRIVDQ-MGSAVLLSLATA 383
            A      + +   A         + +  F +  A+G+  GG +++  +G   +     A
Sbjct: 305 FALVPPLQMRVMEAAKDAPNLASAVNIGAFNLGNAIGAALGGAVINAGLGYPAISLAGAA 364

Query: 384 LVGVGFVTVLVL---GRNV 399
           +  +G V VL+    GR V
Sbjct: 365 MAALGLVLVLLFAWRGRGV 383



 Score = 31.2 bits (69), Expect = 6e-05
 Identities = 69/308 (22%), Positives = 112/308 (36%), Gaps = 42/308 (13%)

Query: 120 VLLGISIGGFWATAIALSGRLAPKGVDVA---KATSIIMMGVTLATVLGVPVGTWLSGLM 176
           V L I   G   T  A  G L     D+     A  +++    +  ++G P+ T  +  +
Sbjct: 8   VALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLMTLATVKI 67

Query: 177 GWRMTFLVTALLGLPVLLAQVLLLPILKPEKPILV-----------------SDLPALFI 219
             R       L+GL  +     L+  L  +   L+                 S + A  +
Sbjct: 68  PRRYL-----LIGLMAIFTLGNLMSALASDYASLLVARVVTSLNHGAFFGIGSIVAASVV 122

Query: 220 NPRARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLMFGVAGVAGNIFAGF 279
            P  R G +A + +GL    A     P     + + G  +G     +G+AG+      G 
Sbjct: 123 PPEKRAGAVAAMFMGLT--LATIGGVPL----ATWLGEMLGWRTAFWGIAGL------GL 170

Query: 280 AANRSVRYTLLLVALMIGTST-ALFPYFATGLTGAAMLIALWGFA--FGAFPACASIWMF 336
            A  ++ Y L  VA   G    A           AA+L+ + G +  F  F   A I   
Sbjct: 171 VAMTTLWYALPNVASPKGEGAMAEIRVLGRRPVLAALLLTVVGSSAMFTVFTYIAPILQH 230

Query: 337 VVAPKDVERGMPLFVALFQVIIALGSFFGGRIVDQMGSAVLLSLATALVGVGFVTVLVLG 396
             A       +   + LF V + LG+ +GG+  D+     L+     L+ V  V  LVL 
Sbjct: 231 EAAASTPF--VTAMLVLFGVGLTLGNVWGGKAADRSIDRTLILSLAGLIAVLLVFPLVLD 288

Query: 397 RNVSNSLA 404
             +  +LA
Sbjct: 289 WPLPTALA 296